Malus sylvestris (European crab apple): 126613455
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Entry
126613455 CDS
T09027
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126613455
03036 Chromosome and associated proteins [BR:
msyl03036
]
126613455
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
126613455
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Topoisomerases
126613455
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
126613455
Centrosome formation proteins
Centriole proteins
126613455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
126613455
NCBI-ProteinID:
XP_050137130
LinkDB
All DBs
Position
2:36593319..36600109
Genome browser
AA seq
1469 aa
AA seq
DB search
MAIEKKLPLQTSNNANIDHPAPADGGGGKGKTIEEMYQKKSQLEHILLRPDTYIGSIEKH
TSNLWVYQNGEMVNRSITYVPGLYKIFDEILVNAADNKQRDPSMDSVKVTIDVEQNCISV
YNNGAGVPVEIHQEERVYVPELIFGHLLTSSNYDDTVKKTTGGRNGYGAKLTNIFSTEFI
IETADGMRLKKYKQVFTNNMGNKTTPVITKCKESENWTRVTYKPDLSKFNMTHLEDDVVA
LMQKRVIDLAGCLGKTVKVELNGTRVPVKSFLDYVDLYLQSAGKSRDTPLLRMTEKVNDR
WEICVSLSDGQFQQVSFVNGIATIKGGTHVNYVTDQITNHVMNVVNKKNKNANLKAHNVK
NYLWVFVNALIDNPAFDSQTKETLTIRPNSFGSKCELTPAFLSKVAKSGIVDSLLSWANF
KQNKDLKKTDGTKTERVHNINKLEDANHAGGKNSEKCTLILTEGDSAKALAMAGLAVVGR
DHYGVFPLRGKLLNVREASTTQVRDNEEIKNIKRILGLQQDKEYTSLKSLRYGSLMIMTD
QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATHKNGNTLAFYSMPEYEAWK
ESLRGNASGWSIKYYKGLGTSTSKEGRDYFQNLDQHKKDFIWIDERDGEAIELAFSKKKI
EERKSWLRQFEPGVHLDQKEKLIKYSDFVHKELIQFSMADLQRSIPSMVDGLKPGQRKIL
FSSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLQPNGQF
GTRNLGGKDHASARYIYTRLSPITRFLFSKDDDRLLDYLNEDGQSIEPTWYVPIIPTVLV
NGSEGIGTGWSSYIPNYNPRDIVANVRRLLDGDAMVPMDPWYRGFTGTIEKTVKESGVSY
TACGIIDEVNETSLRISELPIRRWTQDYKEFLESISEGNDKAKDPFIEGFTQHSDHSTVD
IIVHLREEKLMVAKQEGLLKKFKLTTSISTSNMHLFDRKGVIKKFDTPEQILEDFFHLRL
EFYEKRKKVLLENLELELLKLENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPK
KTKALEPEVAGATENTEDTEENSEAAVEKGARISDYEYLISMAIGTLTIERVQALLADRD
KANAEVDELRKSTPRSLWLKDLDALEMELNELEKSEALAEEAKKRARTQVKNVPASKGTK
QAPKPRKNAKKANNAEASSSVMEIEKAPEIAKRRGGAGPKKAPAAKKQVKSSVVLSDDDD
DEVLELKERLAAYNLDSSPENSAGKDTEVPQEPVQKKEANKKVVMQLDSDDDFEEEIAAA
PKRGGTKAAGKPKAAASKPPAAAKKRGAAANKQQPQTSSGQKLLTDMLKPAAESSRASPE
PKVRKMRASPFNKKSGSVMGRVGLADEMIESDDKVDTPSTEERSEAPVVARARPQRVNRR
QTRYVLSDSESEPASEDSDFDAVDDIDDD
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgagaagaaactcccactccaaaccagcaacaacgccaacatcgaccaccca
gccccggccgatggcggcggcggcaaaggcaagacgatcgaagaaatgtaccagaagaag
agccagctggagcacatcttgctccgaccagatacctacattgggtcgatcgagaagcac
acctcgaacctatgggtctaccaaaacggcgagatggtcaaccgttccatcacctacgtt
cccggactgtacaagatcttcgatgagatcctcgtcaatgccgccgataacaaacagcga
gatccatcaatggactccgtcaaagtcaccattgacgtcgagcagaactgcatcagcgtc
tacaacaatggcgctggggttcccgtcgagattcatcaggaggagagggtctacgtcccg
gagttgatcttcggacacctcctgaccagcagcaattacgacgatacagtgaagaagacc
accggtggacgcaacggctacggcgccaagcttacgaacatcttctccaccgagttcata
atcgagacggcagacggtatgcgactgaagaagtataagcaggtgttcaccaacaacatg
gggaacaagactacgccagtcatcacaaagtgcaaagagagtgagaactggaccagggtt
acgtataagcccgacctgtcgaagtttaatatgacccatctggaagatgatgtggtggcg
ttgatgcaaaagagagtaattgacttggctggatgccttggaaagacagtgaaggttgag
ctgaacggaacgagggtccctgtaaagtcatttcttgattacgttgacctctacttacaa
tctgctggaaaatctagagatactccccttctaaggatgacagagaaagtcaatgatagg
tgggagatttgcgtgagtctcagcgacgggcagtttcaacaggtcagctttgtgaatgga
attgcaacaatcaagggcggaactcatgtgaattacgtaacagatcagatcacgaaccat
gtgatgaatgttgtaaataagaagaacaagaatgccaacctcaaagcccataatgtgaag
aattatctatgggtctttgtcaatgctcttattgacaaccctgcatttgattcccaaaca
aaggaaactctcactattcgcccaaatagttttggatctaaatgtgaacttacaccggcc
ttcttaagtaaagttgcaaaatctggaattgtggatagtcttctctcttgggcaaatttt
aaacagaacaaagacctgaagaaaactgatggaactaaaacagagagggttcataatatc
aacaagcttgaggatgctaaccatgctggaggaaagaattctgagaagtgtactttgata
ttgacagaaggagactcagctaaggctcttgcaatggcgggtcttgctgttgtgggtaga
gatcattacggtgtttttccgttgagaggtaaactgctcaatgtaagagaagctagtacc
actcaggtcagggataatgaggaaattaagaatatcaagaggattctgggactgcagcaa
gataaagagtataccagtcttaagtccttgagatatggcagtctgatgattatgactgat
caggaccatgatggttcccacatcaagggactccttatcaacttcattcattccttctgg
ccatcgctgcttaaaattccatcttttttggttgagtttataactccgattgtcaaggca
acacacaaaaatgggaatacccttgcattttactccatgcctgagtatgaggcatggaag
gaaagtttgaggggcaatgcaagtggctggtccataaaatattataaggggttgggaaca
agcacgtctaaagaaggaagggactattttcaaaatcttgatcagcacaagaaagacttt
atttggatagatgagcgtgatggggaggcaattgagcttgctttcagtaagaagaaaata
gaagagaggaagagctggcttcggcagtttgagcctggagtacatcttgatcagaaggag
aagcttattaagtacagtgactttgttcacaaggaacttatacagttttccatggcggac
ctgcaaaggtctattccgtcaatggttgatggcttgaagccaggtcaaaggaagattctc
tttagctcctttaagaggaactttgtcaaggaagcaaaagttgcccagttttctggttac
gtgtctgagcattctgcctaccaccatggtgagcagagtcttgcaagtactatcattggg
atggcacaggattttgtggggagcaataatatcaatcttcttcaaccgaatggtcaattt
ggtacccgtaacttgggaggcaaagaccatgcaagtgctcgttatatatatactcgactt
tctcctattacaaggttccttttctcaaaggatgatgatagacttcttgactacttgaat
gaagatgggcaatctattgagccaacttggtatgtgccaattattccaacggtgcttgtt
aatggtagtgaaggaattgggacagggtggagctcttacattcctaattataacccgaga
gacattgttgcaaatgtgaggcgtttgcttgatggtgatgcaatggtgccaatggatccc
tggtacaggggatttactggaactattgagaaaactgtcaaggagtctggtgtgagctac
actgcctgtgggatcatagacgaagtcaatgagacgtcactcaggatttcagagctgcca
atccgtaggtggactcaagattataaggaattcctcgagtctatctctgaaggaaatgat
aaagccaaggatccattcattgagggtttcacacagcacagtgatcacagtactgtagat
atcatagtccacttgcgtgaggagaaactgatggtggccaagcaagagggtttgctgaag
aaatttaaactgaccaccagcataagcacgagtaatatgcacctgtttgatcgaaaaggc
gtgataaagaaatttgacactccagaacaaattcttgaggacttttttcacttaaggctt
gaattctatgagaaaagaaagaaagtgctattggaaaaccttgagttggaactgttgaaa
ttggagaacaaggttaggtttatccttggtgtcgtaaatggagagatcattgtgagcaat
agaaagagagctgatctattccttgagctccaacagaaaggtttcactccttttccgaag
aaaaccaaagccctagagccagaagttgcaggggcaactgaaaatacagaagatacagaa
gagaactctgaggctgctgttgaaaagggagcacggattagtgactatgagtatctaata
tccatggcaattgggaccttgaccattgagagggttcaggccctattggctgatagggat
aaggccaatgcagaggttgatgagttgaggaaatcaacaccaaggtcactgtggttgaag
gatcttgatgctcttgaaatggaactcaatgagctggagaaaagtgaggctttagcagag
gaggcaaaaaagagagcaagaacccaagtgaaaaatgtacctgcttctaagggtactaaa
caagcacctaaaccacggaaaaatgctaagaaggccaacaatgcagaggcttccagttct
gtgatggaaatagagaaagctcctgagatagcgaaaaggagaggaggagcaggtccaaag
aaagctcctgcagccaagaagcaagtgaaatcctctgttgttctgagtgatgatgatgat
gatgaagtgcttgagctgaaagaaagacttgctgcctataaccttgattcgtctcctgaa
aattccgcaggcaaggatactgaagtgccacaagaaccagtccagaagaaagaagctaac
aaaaaggtggtcatgcaactagacagcgacgatgatttcgaagaagaaatagcagctgcc
ccaaagaggggagggacaaaagctgctggaaagccaaaggcggcagcatcaaaaccccca
gcggcagcaaagaaaagaggcgcagcagctaacaagcagcagcctcaaacttcatcaggc
cagaagcttttaactgacatgttgaagcctgctgctgaaagttccagggcttcacctgag
ccaaaagtgaggaagatgagggcatcgccattcaacaagaaaagtggttctgtgatgggc
agagttggtttggcagatgagatgattgaaagcgatgacaaggtggacactccttccact
gaagaaagaagtgaagctccagttgtagcaagagctagacctcagagggtgaatcgcagg
cagacaaggtatgtgttgagtgattccgagagtgagccggccagtgaagattccgacttt
gatgcagttgatgacattgacgatgattag
DBGET
integrated database retrieval system
