Malus sylvestris (European crab apple): 126613980
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Entry
126613980 CDS
T09027
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126613980
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
126613980
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
126613980
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
126613980
NCBI-ProteinID:
XP_050137559
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Position
2:complement(9731452..9735836)
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AA seq
605 aa
AA seq
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MKIVTYNVNGLRPRIAQFGSLLKLLNSLDADVICFQETKLRRQELTADLVMAEGYESFFS
CTRTSERGRTGYSGVATFCRVNSAFSSDEVALPVVAEEGFTGVLDSGKGEMNAVAEGLEE
FSRDELLKVDGEGRCVITDHGHFVLFNLYGPRAGGDDTERIEFKLKFFKILEKRWESLLR
QGRRIFVFGDLNIAPTSLDRCDAQPDFENNQFRRWFRSMLVENGGSFFDVFRAKNPDRRE
AYTCWSQSSGAEEFNYGSRIDHILCAGVCLHQEQDLQSHNFVTCHVKECDILTQFKRWKP
GNSLRWKGGQNIKLEGSDHAPVYTSLLEIPSVSQHSTPSLSARYIPMVRGLQQTIVSLLI
KRQAAEQVTTDENFIKESSTEGERISPDQCCTPGAPSGDSCSSSQNSEVLCSKIYEHSST
FAIEATCNTLVTLGGERKKTMCSNEAKKKAKRSSQLSLRSFFQKSPITSNSVSSSSVISS
KGNFPDSNHLSNETPVPENQSGSPKQCELNSSASIQDSDEVDVYSLDKEKNNFALLEWQR
LQQVMQNSIPLCKRHSEPCVARVVRKRGPNFGRRFYVCARAEGPASNPEANCNYFKWASS
KPRQK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacgtacaacgtgaacgggctgcggccgcgcattgcccagttcggctct
ctgctcaaattgctgaattcattggacgccgacgtcatctgcttccaggaaaccaagctg
cgacggcaggaattgaccgccgacttggtcatggcggagggctacgagtcctttttctcc
tgcacccgcacctccgaaagaggccgcaccgggtactccggtgtggcgacgttttgccgg
gtgaattcggcgttctcgagtgacgaagtggcgttgccggtggtggccgaggaaggattc
actggggttcttgacagtgggaaaggagaaatgaatgcggttgcggaggggcttgaggag
ttttcgagagatgagctactgaaggttgatggcgaggggcgttgtgttatcacggatcat
gggcattttgttctcttcaatttgtatgggcctcgagcggggggtgatgatacggaaagg
atcgagtttaagttaaagtttttcaagatcttagagaaaaggtgggagtctctcctgcgt
caggggaggcggatatttgtttttggtgatcttaacattgcacccacttcattagaccgt
tgtgatgcgcaaccagattttgagaacaaccaatttagaagatggtttagatcgatgttg
gtggaaaatggaggctccttctttgatgttttcagggcaaagaatcctgatagaagagaa
gcatacacatgctggtcacaaagttcaggtgctgaagaatttaattatggctctagaatc
gaccacattctgtgtgcaggggtatgcttacaccaagagcaggacttgcaaagccataac
tttgtaacttgccatgtcaaggaatgtgacatattgacacaatttaaacggtggaaacct
ggaaattcactgaggtggaagggagggcagaacatcaaactcgaaggctctgatcatgct
ccagtttacacaagtttactggaaattcctagtgtttcccagcatagcaccccatcttta
tctgctagatacattccaatggttcgaggtctccaacaaaccattgtgtcgttactaatt
aaaagacaagctgctgaacaagttactacggatgaaaatttcattaaagagagttccact
gagggagaaagaatatcccctgaccaatgttgcacacccggtgcacctagtggcgactcc
tgttcttcgagccaaaactctgaagttctatgttcaaaaatatacgagcattcaagcact
tttgctattgaggccacttgtaacaccttggtaacattaggtggtgaacgtaaaaaaaca
atgtgcagcaatgaagctaagaaaaaagcaaaaaggagctcccaactctcattgaggtca
tttttccagaaaagtccgatcactagcaacagtgtgagcagcagtagtgttatttctagt
aagggaaattttccagattctaatcatctctcaaatgaaactccagtaccagaaaatcaa
agtggcagtcccaagcagtgtgaactgaactcaagtgcatcaattcaggatagcgatgaa
gtagatgtctactctttggacaaagagaagaataattttgcgttattggagtggcaaagg
ttacagcaagtcatgcagaatagcataccactttgcaagcgtcatagtgaaccttgtgtt
gctcgggttgtgaggaagcgaggtcctaattttggacgcagattttatgtctgtgcacgt
gctgagggacctgcatctaatcctgaagcaaattgtaattatttcaaatgggcttcctca
aaacctcgacagaaatga
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