Malus sylvestris (European crab apple): 126614019
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Entry
126614019 CDS
T09027
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
126614019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126614019
Membrane trafficking [BR:
msyl04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
126614019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
126614019
NCBI-ProteinID:
XP_050137615
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All DBs
Position
2:812555..815462
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AA seq
199 aa
AA seq
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MKITALLVLKCNPDESDPIILANASDTSHFGYFQRSSVKEFIVFVGRTVARRTPPGQRQS
VKHEEYKVHAYNSNGLCALGFMDDHYPVRSAFSLLNQVLDEYQKNFGDSWRTAKQDGTQP
WPYLSAALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggctttgctggtcctcaagtgcaatccagacgaatccgatcccatcatc
ttggccaacgcctcagataccagtcacttcggctacttccagaggtccagcgtcaaggag
ttcatcgtcttcgtcggtcgcaccgtcgccagacgcaccccgcccggccaacgccagtcc
gtcaagcatgaagagtataaagtacatgcttacaacagcaatggtctctgtgcgctgggc
tttatggatgatcactatcccgttcgaagtgcattttctctgctcaaccaggtgctagat
gaatatcagaaaaattttggtgattcttggaggactgcaaaacaggatggcacacaacca
tggccttatttgagtgcggctctgacgaaattccaggatcctgcagaggctgataagttg
ttgaaaatacaaagggaattggatgaaacaaaaattatccttcataagactattgatagt
gtgcttgcacgaggtgagagactggacagtttagttgagaagagttcagatcttagtgca
gcatcgcagatgttctacaagcaggcaaaaaagaccaatcagtgttgtaccatattgtaa
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