Malus sylvestris (European crab apple): 126614025
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Entry
126614025 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126614025
KO
K24755
WD repeat-containing protein 76
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126614025
03036 Chromosome and associated proteins [BR:
msyl03036
]
126614025
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126614025
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126614025
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126614025
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
126614025
DSBR (double strand breaks repair)
Other DSBR factors
Others
126614025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
126614025
NCBI-ProteinID:
XP_050137621
LinkDB
All DBs
Position
2:892370..895069
Genome browser
AA seq
517 aa
AA seq
DB search
MATEKLTEYERKRLENIRRNDEMMSSLKLQSIKAQVSVSTKRPRVETKSYNVSPKKQPKT
QTPIVMRRSLRTRGLPPDAKGLSDEVLESMAETPNSSSPLKGLPRYLGPLSMKDAYSGVS
DRALIETILDISKKPQLDASVKGEIKGENGRFEGGKGESFSINEENEVEIGEKTEPLSEG
IGGFTCGLVKKEENEVWSSLKVESLTLKPENVARVVPGRIMNVKFFPCTSSNMIAVGNKY
GNVGFWHIDSKEDEESGIYLYHPHSGPISGILIQQHCMSKIFTSCYHGYIRLMDAEKEVF
DLVQSCEKPIYSMSQQSKDPNCLYFAEGNGGLSVWDQRTGSFSNQWSLHEYRINSIDFSS
ANPNLMATSSSDGTACIWDLRSIHADKTLRTVSHNRAVHSAYFSPSGGFLATTSIDDTVG
ISSGANFQDTSMIYHNNNTSRWISKFRGIWGWDDAYVFIGNVKRGVDVISPAARRTVLTL
ESPHMTAIPCRFDAHPYNVGMLAGSTAGGQVYVWTLG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgagaaactcacagagtacgagcgtaagaggctcgagaacatccgccggaac
gatgaaatgatgtcttccctcaagctccaatccatcaaagcccaagtctctgtctccacc
aaacgcccaagggtcgagaccaaatcgtacaatgttagtccgaagaaacaacccaaaacc
cagaccccaattgtcatgaggcgatctttacgcacgcgcgggttaccgcccgatgcgaag
ggcctaagcgacgaggttctcgaatccatggccgaaaccccgaattcttcgagcccattg
aaggggttgcctcgctatttgggtcctcttagcatgaaagatgcctacagcggagtgtca
gatcgagctttaatagaaacaattctggatatttcgaagaagccccaattggatgcttca
gtgaaaggtgaaattaagggcgaaaatggcagatttgagggtggcaaaggtgagagcttt
tcgattaacgaagaaaatgaagttgaaattggtgagaagacagaacctctgagtgaggga
attggtgggtttacttgtggtttggttaagaaggaagaaaatgaagtgtggagtagttta
aaggtagagtctttgactctaaaaccggagaatgtagcgagggttgtgcccggcaggatt
atgaatgtgaagttttttccttgtactagttcgaatatgattgcggttggaaataagtat
gggaatgttggattttggcatattgattctaaggaagatgaagaaagcggaatatatttg
tatcatccacatagtggtcctatttcggggattttgattcagcaacattgcatgtcaaag
atctttaccagttgttatcatggctatatccggttgatggatgccgagaaagaggtgttt
gatctagtacaatcctgtgaaaagcctatatactctatgtctcaacaatcgaaggatccg
aactgcttatattttgctgagggcaatggaggtttaagtgtctgggatcagagaactgga
agcttctcaaaccagtggtctttgcatgaataccgaatcaatagcattgactttagctca
gcaaaccctaacctcatggccactagttcctcagacggaactgcctgcatttgggatttg
agaagtattcatgcagataaaactttacgaacagttagccacaatagggctgtgcattct
gcttacttctcgccttctggagggtttcttgcaacgacaagtattgacgatacagttggt
atatcgagtggagctaatttccaggacacatcaatgatataccataacaataataccagc
agatggatttctaagttcaggggaatatgggggtgggacgacgcctacgtcttcataggc
aacgtgaaaagaggagtagatgtgatctccccagctgcaagaagaacagtgctcacttta
gagagcccgcacatgactgcgattccatgtcgatttgatgctcacccttacaacgttggg
atgctagcaggatccacagccggaggccaagtttatgtatggacattgggctag
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