Malus sylvestris (European crab apple): 126614195
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Entry
126614195 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126614195 isoform X1
KO
K23288
syndetin
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126614195
Membrane trafficking [BR:
msyl04131
]
Protein recycling
Others
EARP complex
126614195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
126614195
NCBI-ProteinID:
XP_050137738
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Position
3:complement(12766544..12789492)
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AA seq
1120 aa
AA seq
DB search
MISEVRIEMRPNLSPFGSVLANPFVFNGDLSEGFESPGVLFLVPVLLFQGGAMDLSKVGE
KILSSVRSATSLGLLPSASDRPEVPARAAAAAAVARAIAGLPPHQRFSLSSSSEELISIY
GSRHHGQEVEEIEEEFYEEDLDPVRNILEHIPSEESELAYFERQATLRLAQLDRVAERLS
RNVMEHHEVMVKGMHLVRELEKDLKVANVICMNGRRHLTSSRNEVSRDLIVNSNSKKKQA
LLDMLPVLTELGHALKMQAELEFLVEEGNYCKAFQVLSEYLQLLDSFSELSAVQEMSRGV
EVWLGKTLQKLDSLLIGVCQEFNEEGYITVVDAYALIGDISGLAEKIQSFFMQEVLSETH
SILKNIVQEDQGFQMQNSRLTYSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMGFQL
DNWDSARKTPSMTQKESDVSPTPGGVQQISPPCSSQKVNGSLVESVDIVPGSAYIDDPTT
TCSAVESTGNTTSISYQNLVDEASKDDSTTSTSGSPWYQLRKDATAFVSQTLQRGRKNLL
QLTTTRVSVLLSSTSVSSASIHQFLKNYEDLGVFILAGEAFCGFEAADFRQKLKAVCENY
FVAFHRQNIYALKMVLEREIWLIMPPDTVQEITFPELAGDGAPIIVSFEGKSNARVLHSK
STSVVDTGTKKSGFSNWLRNGNPFLLKLAHTSKEGLKWNGTTGEFDGNFSQRLGDKVSPP
SSDSRHSNGANSVSEEENEDLLADFIDEDSQLPSRISKPRLSRNQSLHCNDGEITAQTGS
SICLLRSMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFAQQNSNSGGKGSPDPI
NYRLKTALSRIQKDCDQWIKAPSSSSTSINSSFADITPMSPPSNAPGTSFGLKERCAGAD
TISLVARILHRSKAHLQTMLLQRNATVVEEFYAHLVDAVPDLVKHIHRTTARQLLHINGY
VDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLDYGLEIVAQT
LIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVAMNVKPHLQIVEAFIKAYYLPETEYV
HWACAHPEYTRNQIVGLINLVATMKSWKRKTRLEVLEKIE
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggaggttcgaattgaaatgcggccgaatctgtctcccttcggcagcgttttg
gcgaatccgtttgtgtttaatggcgatttgagcgagggctttgagagccctggggttttg
ttcttggtcccggttttgctgttccaaggtggtgcaatggatttgtcaaaggtcggcgag
aagattctgagctccgttaggtccgccacatcgctcggccttcttccttctgcttctgat
cgtcccgaggttcctgcacgagctgcggctgctgcagctgttgctcgtgctattgctgga
ctgcctccacatcaaaggtttagtctctcatcaagctctgaagaattgatctcaatatat
ggaagcagacatcacggtcaagaagtggaggagatagaggaagaattttatgaagaggac
cttgatccagttagaaatattttagagcatattccatctgaagaaagtgagctggcttat
tttgagagacaggccactcttagattggcccaactggatagagtagctgaacgtttatcc
cgcaatgttatggaacatcacgaagtaatggtgaaggggatgcatttggtcagggaattg
gagaaagacttgaaagttgcaaatgtcatctgtatgaatggaaggcggcatctgacctca
tcaaggaatgaggtttctagggatctcattgtaaattccaattccaaaaagaaacaagct
cttctggacatgcttcctgttttaactgagcttggccatgcactgaaaatgcaagcagag
ctcgagtttctggttgaggaaggaaattactgcaaggcctttcaagtcctgtctgaatat
ttacagctgttagatagtttttcagaactttctgcagtacaagagatgagccgtggtgta
gaggtttggctgggaaaaactcttcaaaagctggattccttgttgataggagtgtgccag
gagttcaacgaggagggctatataactgtggtcgatgcttatgcactaattggggatatc
tctggccttgctgagaagatacaaagtttctttatgcaggaagttctatcagaaacccac
tctatattgaagaatattgtgcaagaggatcagggatttcaaatgcaaaatagtcgactt
acctacagcgatctatgccttcagatacctgaaccaaagtttaggcagtgtttgttaaac
acactagctatccttttcaaattgatgtgttcatatcatgaaatcatgggctttcagcta
gataattgggattcagcccgtaaaactccaagcatgacacagaaggaaagtgacgtctct
cccactccaggaggggttcagcaaatttcacctccttgttcttcccaaaaagttaatggc
tctctcgtcgaatctgtagatatagtgcctggttcagcctacatagatgatcctacaact
acctgctctgcggttgaatctacaggaaacacaacttccattagttatcaaaatttagtt
gatgaggcaagtaaggatgacagtacaacatcaacaagtggatccccgtggtatcaactg
aggaaagatgccacagcatttgtttcacaaacccttcagaggggacgcaaaaatctcttg
caactcacaactactcgtgtatcggtcttgctttcttcgacttctgtttcttctgctagc
atacaccaattcttgaaaaactatgaagatctgggtgtcttcatcttggccggggaagca
ttttgcggatttgaagctgctgacttcaggcagaagttgaaggcagtatgtgaaaattat
tttgtagcttttcatcggcagaatatatatgcgcttaaaatggtgttggaaagagaaatt
tggttgataatgccaccagatacagtacaagaaattacatttcctgagcttgccggtgat
ggagcacctataattgtttcgtttgagggtaagtcgaatgccagggttctacattctaag
tctacaagtgttgttgatactggcaccaagaagagtggattctctaattggcttagaaat
ggaaacccctttttgttaaagctggcacatacatccaaagaaggtcttaaatggaatggc
acaactggtgaatttgatggtaattttagtcaaaggcttggtgataaggtctctccacca
agcagtgattcaagacattctaatggtgctaattctgtttcggaagaagaaaatgaagat
cttcttgcagactttattgatgaggatagtcaactcccaagtcgaatttcgaaacctaga
ctttcaagaaatcagtctttacattgtaatgatggagaaatcacagcccaaactggatcg
tctatttgtcttctaaggtcaatggataaatatgccaggcttatgcagaaattagaaata
gtcaacgttgagttcttcaaggggatatgccagttgtttgaggtattttttcattttgtg
tttgaaacatttgctcagcaaaacagcaattcaggtggaaaagggtcacctgatccgatt
aattatcggctgaagacagccttgtccagaatacaaaaggactgtgaccagtggataaag
gccccgtcatcttcatccacatctataaattcttcatttgcagacatcactccaatgagt
cctcccagtaacgcaccaggaacatcctttggtctcaaggaaagatgcgcaggtgctgac
actatctcccttgttgctcgaatattgcatagatctaaagctcatctccagacaatgcta
cttcagcgtaatgctactgtagttgaagaattctatgcacatctagttgatgctgtacca
gatcttgtaaagcacatccataggacaactgcaagacaactgctccatattaatggctat
gtggatcggatagctaatgcaaaatgggaagtaaaagagcttggactagagcataatggg
tatgttgatttgttattgggagaattcaagcactataaaacaaggcttgctcatggagga
atccgcaaggaggttcaagacctcctcttagactatggacttgaaattgttgcccaaact
ctcatagaaggtctctcccgtgtcaagaggtgtacagatgaagggcgggctctcatgtcg
ttggatctacaggttttgatcaatggcctgcagcattttgtggccatgaatgtgaagccc
catttacaaatagttgaagccttcattaaggcatactatctcccggaaactgaatatgtg
cactgggcatgtgctcacccggaatacacaagaaatcaaatcgttgggttgatcaacctt
gttgccacaatgaaaagttggaagagaaaaaccagattggaggtgttagaaaagattgaa
tga
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