Malus sylvestris (European crab apple): 126614243
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Entry
126614243 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126614243
KO
K19025
AP-5 complex subunit zeta-1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
126614243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126614243
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
126614243
SSDB
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Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Vps35
PGA43
Motif
Other DBs
NCBI-GeneID:
126614243
NCBI-ProteinID:
XP_050137781
LinkDB
All DBs
Position
3:27578478..27586336
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AA seq
564 aa
AA seq
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MGDWELHLRTLSSSARDSNVANDPASDSSLLQSVKKLYELCKAENSEDLVARVYTQINKL
FQRSVASLSQSRTSIGLLLLAILQFYLDFGEMVLHDADPSLRTFFRSCLSREFADPVVAE
STLEFLNVNKKKLLTSFPTLLPQFFPLMLKLIAWNGEKLEKSYMKVFPGLISPGSFLPLF
PALVDLPILVVALEKVEKSSGSLVGNSIASMQKSSAPEMLLALMDEAYTGSTIGDGGGDS
ESEDSSSIDVADPLFLDLLKDENDGIAERHWTSPAMAATLQAVINTPQSNRLKNILRMTP
RFLDVYFAIALRDVNNSLVCALIPLLMSRNATIFPDRSFSYEVRKRLLEFMLAAFQRSPD
FIALLKKPIMDRLGEAYDSPEKTELALQLCWAIGEHGGGGRSHKDEARELFESLELLLYE
NLSSSRLGLGQESTFSSHNQTYRKSSQSRLLCFVVTAIAKLATIHRELLPRAHFSLGKVA
RSRISDERVWRRARDYLGLMTEPAISLSVLGPSRPSNGQMQNRGTVKWSDGASKMIAHVP
FYILGEQEGPPFHDFLFSDILPRR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattgggagttgcatctgagaaccctttcaagcagtgccagagactccaatgtc
gcgaacgatcccgcttccgactcctctcttctccaatccgtgaagaagctgtatgaattg
tgtaaagctgagaattcagaggatttggtggcgagagtttacacgcagattaacaagctc
tttcagcgctcggtggcttcgctgtctcaatctcgaacctccattggccttctactgctg
gccattcttcaattttaccttgactttggggagatggttctacatgatgctgaccccagt
ctcaggacatttttccgttcatgtttgagccgtgagtttgcagatcctgttgtcgcagaa
tcaacccttgaatttctgaacgtcaacaagaaaaagcttttaacttctttccctacctta
ctgcctcaattctttcccttgatgttaaagttgattgcatggaatggggaaaagttagaa
aagtcatatatgaaagtttttccagggttgatttcgcctgggtcatttcttccattattt
ccagctttggtagacttgccaattttggtagtggcattggagaaggttgaaaagagctcg
ggatcgttagttggaaacagcattgcatcaatgcagaagagttcggctcccgagatgctg
ctcgctcttatggatgaagcatatactggttcaacaataggagatggagggggagactca
gaatcagaggacagcagttcaattgatgttgctgatcctctgttccttgaccttctaaag
gatgaaaatgatggcattgctgaacgccattggacctctcctgcaatggctgcaacttta
caggctgtaattaatactccccaatctaataggctgaaaaatatactacgcatgacacca
cggtttcttgatgtgtattttgctatagcactgcgtgatgtcaataattctttggtctgt
gcattgatacctctactcatgtccagaaatgccacaatatttcctgacagaagtttttct
tatgaggttcgtaagaggctattagaattcatgcttgccgcatttcagcgctctccagat
tttattgcacttttgaagaagcctataatggacaggctaggggaagcttatgacagccca
gaaaagacagagttggcattacaattgtgctgggccataggagagcatggtgggggtgga
cgatctcacaaagatgaagctcgcgagctttttgagagtttagagctactcttgtatgaa
aacctttcatctagtcgtctaggcctgggacaggaatcaacctttagctctcataatcaa
acttaccgaaagtcatcacaatcaaggcttctatgctttgttgttacagccattgcaaag
ttggccaccatccaccgtgaattgctgcctagggcacatttttccttgggcaaggtagct
cgctctcgaatatcagatgagagggtctggagacgggctcgtgattatttgggcttaatg
acagaacctgcaatttccttgtctgtattggggccttcccggccttcaaatggacaaatg
cagaaccgcggtactgtcaagtggagtgatggtgcatcaaagatgattgcacatgttcca
ttttatattcttggtgaacaagaaggtccacccttccatgattttttgttctcagatatt
cttccaagaagatga
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