Malus sylvestris (European crab apple): 126614256
Help
Entry
126614256 CDS
T09027
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126614256
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
126614256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
126614256
NCBI-ProteinID:
XP_050137794
LinkDB
All DBs
Position
3:complement(343486..359419)
Genome browser
AA seq
1958 aa
AA seq
DB search
MWTNVFKIGGFHQVSWFQFLPHESELIPLPDKSAKDAATRLVLSSHVQLQKDGFLSTWTN
SFVGPWDPSQGVHNPDEKIKLWLFLPGRHSTVADSAQAAVSKLRVVASGLWMSPGDSEEV
AAALSQALRNRIERALSGLAYMRFGDVFSKFHPSESEELLRKGQPTVEFIFAATDEGIFV
HALVSAKHVRALSNGDLERRLKHSSKNSGCGLPVIVSPHGMCGRLTGCCPSDLVKQVYFS
SSKFKTGNGFIGLANHASQGSGCQLRGQNCYVEVTLGCPRPGSDRSLQANSNSLRNTGKH
NLSESPALGRGDQKLALDNSSVYEKTFVYPAEAVLVPALQVARSSLKRLWLQNWIGPSMA
GSSFFMLCSENIEPVEDWNETDGIRTQRWYNSSSNSNSSSISSISSSSSDSDYTMATGAS
ELEADADSLTCRQSGLSFNDRLGNDISKSGFKRPRAGMADSFAEVGTATSASLQDAYNSD
FSSMEVSNSAIPGLANEQIGSHWDWDVDDRDGTDIHALINEFGDFGDLFEDDVLPFGEPP
GTAESQSLMFSAPDPGDVVDNPVGMMDVSDQLLLSDGFASFESFIPPPPAAMEEPLIKNQ
EVINSVMSSAPVNCSSASNISEFDHIRKAEALMTFAPEYGAVETPTSEVSSSVFRSPYLP
KSRKAESSNSNSSIYTYGPTPPSSCFDGSDEKTGMPINSKSCPGKKDASNIIRSKNYYTH
VESGKDQQDGRLLTGSNGIVLAHDGAASSPFPILNSTNAVKVAQRKITEGRFESENPFLS
MRTILATEVECILFQTSMCRIRHTLLSSSSLSSTGFSSLPGDQSVMPENMSGKYEAKRKE
SIPVRIAGDIDRGMTDGHPNAPVGVWRTVGAPRAPKPTSSSSKEISPSLPHSSFNEESLL
SYGQRQPLQELLDGFTLLVQQATSFVDLALDSDCGDGPYGWLALQEQWRKGFSCGPSMVH
AGCGGTLASCHSLDIAGVELVDPLSADVHASSVISLLQSDIKTALKSAFGILDGPMSVTD
WCRGRNQSGESTLDGYSAESAISECRDVAPSIGEPLSPSPSSSAGSTYIKVSSAMDGVKA
EETSQRRSNQDNCTSESDLQTCSRLRPTLFVNPLPAILVGYQDDWLKTSASSLKHWEKAP
LEPYALQKPITYSVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHLPQIVGNQMEVDSGR
RPSPGFVLLDCPQAMKMESRNASFVSSISDYFLSLSNGWDLTSYLKSLSKALRGLKLGHC
LSTNAKEGSSGPSTVIYVVCPFPEPIAVLQTVIESSVSIGSVIFQSDRERRSLLHSQVSK
ALSYSATVDEASISNILVLSGFSIPKLVLQIVTVDAIFKVTSPSLNELVILKETAFTVYN
KARRISRGASSDAVQSSSLSNRPHAVLTQMSSPTPGMWKDCVGSRITGHSLPREGEIDAS
LRTGGWDSSWQTTRSGAVSCDPNRIGDFFPQDETRYMFEPLFILAEPGSLERALSPLAFG
NLSLESSKPLSDDSSGGFLQNASLGGSADSGSGSQDGSELDKTPSLHCCYGWTEDWRWLI
CIWTDSRGELLDSHIFPFGGISSRQDTKGLECLFVQVLQQGCQILQACSSDTGVAKPRDF
VIARIGSFYELEYQEWQKAINSVGGSEVKKWHLQLRRSVSDGMSASSNGPSMQQQEMSMI
QERTLPSSPGPLYGSSHSKMSGYMKGGLGQPSVRKQLMGTQLMDSSRSLLQWVQSISFVT
IAIDHSLHLVFQADTQSPGAQGAVGMGSSAYLEGFTPVKSLGSTPASHILIPSPSMRFLP
PTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTCFVVSKAVPTVRRDRRSNLKEEWPSSLL
VSLIDHYGGNSFSQDKLMRGNTKQAGRSPSLEARELEFETHVILESLATELHALSWMTAS
PAYLERRSALPFHCDMVLRLRRLLHFADKELSRHQEKA
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaatgttttcaaaatcggtggttttcatcaagtatcatggtttcagtttctt
ccccatgagtctgagttgatcccactaccagataaaagtgcgaaagatgctgccacacgg
ctggtactttcatcacatgtacagttgcagaaggatggatttctcagcacatggaccaat
tcctttgttgggccttgggatccatctcaaggtgtgcacaatccagatgagaaaattaaa
ctctggctttttcttcctgggcggcattcaactgttgctgactctgctcaagctgcagtc
tctaaattaagagttgttgcatctggactttggatgtcccctggggactcagaagaggtt
gcagccgccctttctcaggctttaaggaatcgtatagaaagagcactatctggacttgcc
tacatgagatttggagatgtattttcaaagttccacccatcagaaagtgaagagcttctc
aggaaagggcagcctacagttgaatttatctttgctgccactgacgagggaatctttgtg
catgctttagtatctgcaaagcatgtccgagcactttccaatggagatctagagagaaga
ctaaagcattcttccaaaaatagtggttgtgggcttccagtgattgtttctcctcatgga
atgtgtggtaggctaactggatgctgtccaagtgatcttgtcaaacaagtgtattttagt
tctagcaagtttaagactggaaacggttttattggtttggcaaaccatgcctcacaaggt
tctggttgccaactaaggggtcaaaattgctatgttgaagttacccttggttgtcctaga
cctggaagtgacaggtccttgcaagcaaactcaaactccttaagaaatacaggaaagcat
aacctttctgaatctcctgctttgggaagaggtgatcagaagttggcattggataattca
tccgtttatgaaaaaacatttgtatatccggctgaggcagtgcttgtcccggccctgcaa
gtggccagatcatctctgaagagattatggctacaaaattggattggaccctccatggct
ggctcatctttctttatgctttgttctgaaaacatagaacctgtggaggactggaatgaa
accgatgggattcgcactcaacgttggtataatagtagcagcaacagtaatagtagcagc
attagtagcataagcagcagctccagcgatagtgattacacgatggctacaggagccagc
gaactagaggcagatgccgattctttaacctgtagacagtctgggttatcttttaatgat
cggttgggaaatgatatctccaaatcgggttttaagcgtccgcgagctggaatggcagat
tcatttgctgaagtaggtacagctacaagtgcttctctgcaggatgcatacaactctgat
tttagttccatggaagttagcaactcagcaatccctggacttgcaaatgagcagattgga
tctcattgggattgggatgttgatgacagagatggcactgatatccatgctttgattaat
gaatttggagatttcggtgacctctttgaagatgatgttttgccttttggggagccccca
ggaactgccgaatctcagtctctcatgttttctgcaccagaccctggcgatgtagttgac
aatccagttgggatgatggatgtttctgatcagttgcttttgtctgacggctttgcatcc
tttgaaagctttattccaccccctccagcagccatggaagagccgctcattaaaaatcaa
gaagtcatcaatagtgtgatgtcctcagctccagtcaactgctcttcagcatctaatata
agtgaatttgatcatataagaaaagctgaggcactgatgacatttgctcctgaatatgga
gctgttgaaacacctacaagtgaagtttcatcgtccgtttttagaagcccatacttgcca
aaatctcgaaaagcggagagttcaaattcaaactcaagcatttacacatatggtccaaca
ccaccttcttcttgctttgatggatctgatgagaagactggcatgccaataaattcaaaa
tcatgtcctggaaagaaggatgcaagcaatattatccggtcgaagaattattacactcat
gtggagagtggaaaagatcaacaagatggaagattgcttacaggtagtaatggaattgtg
ctcgcccatgatggtgcagcatcatctcctttcccaattctcaattctacaaatgctgtt
aaagtggcccagaggaaaatcactgaaggcagatttgagtcagaaaatccctttctgtct
atgaggaccattcttgcgactgaagttgagtgcattctatttcaaacttcaatgtgtaga
atacggcacaccctattgtcttcaagcagtctctcatctactggtttcagtagtctgcca
ggtgaccaaagtgtcatgccagaaaacatgtctggaaagtatgaggctaagaggaaagaa
tcgatacccgttagaattgctggtgatattgatagaggaatgacagatgggcatcctaat
gcacctgtgggtgtctggcgcactgtaggagctcctagagcccctaaacccacaagttca
tctagtaaagaaattagcccgtctttgcctcattcttccttcaatgaagaaagtttacta
tcctatgggcaaagacaaccacttcaggaacttctggatggatttacattactcgtacag
caagctacatcctttgttgatttggccctagactcagattgtggtgatggtccttatggt
tggctggcattacaagagcaatggaggaagggattttcttgtgggccttctatggtccat
gcaggttgtgggggcacactggcttcttgtcactccctggacattgctggtgtggagtta
gttgatccactctctgcagatgttcatgcttcatctgtgattagtttgctgcagtctgac
ataaagacggcactaaagtctgcatttggtattctggatgggccaatgtcagtcactgat
tggtgtagaggtcgcaaccaatcaggtgaaagcacgcttgatggatattctgctgagtcc
gctataagtgaatgtagagatgttgcaccttctattggagaaccattgagcccgtctcca
tctagttctgctggatcaacttacattaaagtttccagtgcaatggatggagtaaaagcg
gaagagacatcccaaagaagatcaaaccaagacaactgcacttctgagtctgacctgcag
acatgctcccggctaagacctacactttttgttaatccgttgcctgctatacttgttggg
tatcaggatgactggcttaagacatcagcaagctctctgaaacattgggaaaaggctccg
cttgagccatatgctctacaaaaacctattacttattctgttgtatgtccagacattgat
ccccttacatctgctgctgctgattttttccaacaactaggaactgtctatgaaacatgc
aaactgggaactcatttaccccagattgttgggaaccaaatggaggtggactctgggaga
aggccatctcctgggtttgtcctacttgattgccctcaagcaatgaagatggaaagcagg
aatgcatcttttgtgagctcaataagtgattattttctctctctttcgaatggatgggac
ctgacaagctaccttaagtctctctcaaaggcactcagaggtttgaaacttggtcactgc
ttgtccacaaacgcaaaagaaggaagtagtggtccttcaacggtgatttatgttgtgtgc
cccttccctgagcctattgcagttttacagactgtcattgagtcttctgtttctatcgga
tcggtcattttccaatcagacagagaaaggagatctctattgcacagtcaggtttccaag
gcattgagctattcggcaacagtggatgaggcatcaatatcaaatattttagtactttct
ggttttagtattcctaaattggtactgcagattgtgacagtggatgccatttttaaagtt
acaagcccatcactgaatgagcttgtaattctcaaggagactgcttttactgtttacaac
aaggctcgccgaatatcacgaggagcatctagtgatgcagtgcaatcatcatcactgtct
aatagaccacatgctgtcctcacacaaatgtcgtctcctactccggggatgtggaaggat
tgtgttggctctcgaattactgggcattcccttccaagagagggtgaaattgatgctagt
ttgaggactggtggctgggatagttcatggcaaacaacaagaagtggagcagtaagctgt
gatcccaacagaattggagatttttttccgcaagatgagactcgctacatgtttgagcca
ctttttatccttgcggaacctggttctctagagcgtgcattgtcacccttagcttttggt
aatttgtcattagaatcttcaaagccattgtcagatgacagtagtggaggctttctgcag
aatgcaagtttgggtggaagtgcggattctggatcaggctctcaagatggatctgagcta
gataagactccaagcctgcattgttgctacggatggacagaggactggcgttggctaata
tgtatctggacagattcaaggggagaattacttgatagccacatattcccttttggtgga
atcagcagtagacaggacacaaaggggttggaatgcctttttgtgcaagttctgcagcaa
ggctgtcagatactgcaggcatgctcttctgataccggtgttgccaagccaagggacttt
gtgattgcacgcattggaagtttctatgaacttgaataccaagagtggcagaaagcaatt
aattcagttgggggttcagaagtgaaaaaatggcacttgcaactgcggcgatctgtgtct
gatgggatgtctgctagtagtaatgggccttccatgcaacagcaggaaatgagtatgatt
caagaaagaaccctaccttcttcacctggccctctgtatggcagctctcactcaaaaatg
tctggatatatgaaaggtggcttaggacaaccttctgtcagaaagcagctcatgggcaca
cagttaatggacagctcaaggagtttgcttcagtgggtgcaaagtatcagctttgttaca
attgcaattgatcactctttgcatcttgtttttcaagcagatacacaatctccgggtgct
caaggtgctgtcggtatgggctcgtcagcatatctggaaggcttcacacctgtgaagtct
cttggttccacacctgcttctcacattctgatcccatcaccgagcatgcgattcctcccg
ccaacacctcttcagctgcccacgtgcctcactgccgaatcacctccactagcccatctc
cttcatagtaaaggctctgctatccccctttctacttgttttgtggtttccaaagctgta
cctactgtgaggagagatcgtaggagcaacttgaaagaagaatggccttcatctcttttg
gtcagtcttattgatcattatggaggtaatagctttagccaagacaaactcatgaggggt
aataccaaacaagctggaaggagtccaagcttggaagctagagaattggagtttgagact
catgtcattctggaatccctggcaaccgagcttcatgcgctctcatggatgactgcgagt
ccagcgtacctggagaggcgaagtgcactgccgtttcattgcgatatggttttgagattg
aggaggcttttgcattttgctgacaaggagctctccaggcatcaagagaaggcttag
DBGET
integrated database retrieval system
