Malus sylvestris (European crab apple): 126614261
Help
Entry
126614261 CDS
T09027
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126614261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126614261
03110 Chaperones and folding catalysts [BR:
msyl03110
]
126614261
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126614261
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126614261
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
126614261
Messenger RNA biogenesis [BR:
msyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
126614261
Chaperones and folding catalysts [BR:
msyl03110
]
Heat shock proteins
HSP60 / Chaperonin
126614261
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
126614261
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126614261
Exosomal proteins of other body fluids (saliva and urine)
126614261
Exosomal proteins of breast cancer cells
126614261
Exosomal proteins of colorectal cancer cells
126614261
Exosomal proteins of bladder cancer cells
126614261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
126614261
NCBI-ProteinID:
XP_050137801
LinkDB
All DBs
Position
3:238277..242462
Genome browser
AA seq
604 aa
AA seq
DB search
MASTFAAMTSVGSLAAPSRVIDRKFDNLSSRASISSFSLSRRQHVAMRRTRAPRICAMAK
ELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVEL
EDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEK
TTRALVNELKLISKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGKSA
ENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEDAIRG
GYPVVIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGDRKSQYLDDIAILTGGTVIRE
EVGLTLENVGKEVLGHASKVVLTKDTSTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYERE
KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLA
SKVDAIKDTLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNA
ATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAVPAGNPMDNS
GYGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacatttgcagccatgacttcagttggttcgttggctgctcctagccgtgtc
attgacaggaaattcgacaacttgtcgtctcgtgcttcaatctcttcattctctctctct
aggaggcaacatgtggctatgaggaggacacgagctcccaggatctgcgccatggccaag
gaattgcacttcaacaaggacggctctgccatcaagaaattacagactggtgtcaacaag
ctcgccgaccttgttggggttacacttggtccaaagggaaggaatgtcgttctagagagc
aagtatggctcccccaaaattgttaacgatggtgtaaccgtcgcaaaagaggttgagttg
gaggaccctgttgagaatattggagctaagttagtgagacaggcagctgccaagactaat
gacctggctggtgacggtacaaccacttctgttgttcttgcacaaggtcttattgctgaa
ggtgtcaaggtggttgcagctggggcaaaccctgttttaatcacacgtggcattgaaaag
accaccagagctctagtaaatgagcttaagttgatctccaaagaggttgaagacagtgag
ctggcagatgttgcagctgttagtgcaggaaacaattacgaagtaggaaacatgattgct
gaagctttgagcaaggtgggtaggaagggtgtggtgacccttgaagagggaaagagcgct
gagaacagcctgtatgttgttgagggaatgcaatttgatcgtggttatatctcaccttac
tttgtcactgacagtgagaaaatggcggttgaatatgagaactgcaagttgcttcttgtt
gataaaaaaattacaaatgcaagggaccttattaacattttggaggatgctattagagga
ggatacccagttgtaatcattgcagaagacattgaacaagaagctcttgcaactcttgtt
gtaaacaagctaagaggagctcttaagattgctgcccttaaagctcccgggtttggtgat
cgcaagagccagtaccttgatgacattgctattctaactggaggaactgtcatcagagag
gaagtaggactcacattagagaatgttggaaaggaggtcctaggccatgcatcgaaagtg
gttcttacaaaggatacctccacaattgttggtgatggaagtactcaggaagcagttaac
aagcgagttgcccaaattaagaacctcattgaggcggccgagcaggactatgaaagagaa
aagcttaatgaaaggattgcaaaactatctggtggtgttgctgttatacaggttggagca
caaacagagacagagctgaaagaaaagaaactgagagttgaagatgctctgaatgcaaca
aaggcagctgttgaggaaggtattgttgtcggaggtggatgcacacttctgaggttagca
tcaaaggttgacgcaatcaaagatactcttgataatgatgaagaaaaggttggagcagat
atcgttaaaagagctcttagttaccctctgaaattaatcgccaagaatgctggtgtaaat
ggaagtgttgtcagtgagaaggtgctttcgagtgacaatccgaagtatggatataatgct
gccactggaaactatgaagatttaatggctgctggaatcattgatccaaccaaggtggtg
agatgttgcctagagcatgcatcctctgttgcgaaaactttcttaatgtcagattgtgtg
gttgttgagattaaagagccagaacctgcagtgcctgccggcaaccccatggacaactca
ggctacggttactaa
DBGET
integrated database retrieval system
