Malus sylvestris (European crab apple): 126614613
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Entry
126614613 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126614613 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03030
DNA replication
msyl03410
Base excision repair
msyl03420
Nucleotide excision repair
msyl03430
Mismatch repair
msyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126614613
03410 Base excision repair
126614613
03420 Nucleotide excision repair
126614613
03430 Mismatch repair
126614613
03440 Homologous recombination
126614613
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126614613
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126614613
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126614613
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126614613
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
126614613
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
126614613
MMR (mismatch excision repair)
DNA polymerase delta complex
126614613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
126614613
NCBI-ProteinID:
XP_050138218
LinkDB
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Position
3:complement(31741203..31747640)
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AA seq
572 aa
AA seq
DB search
METLGIIQDIETLVSDQLQVASYKWLSRNYFVSSNAAKRLLQEFVEKHGNGFEVVYVLAG
WLKSDPSSYHIRLVSGPKLAEAKEEFDGNCSVGVYSVQACIPKDPAALWNAEFVQAEKLF
KQAPMVENCLRDNRFCGISNSFVKRNVDGAPLSTESPQLNSEAVIGQPENSNWGSSSNSK
REAKWAQMRREDEESDEEVQVRRNKQNIAAAMAADMECQPTKEQPQWGGSIAGRSYKPRN
RAMMHVNLMNNYFDPNSVYTEEDFRRDVQQANKRPADKEKVQNENSSSASGGSLANFWGQ
ASVKSKSDAPEKYNNSIPDHTGASAEPQTCAREAVTGSSDDDGQQVNFKRSSNGGGTRKR
RVVFDFSDDDEDAVNLASREIPKGQSCLYLKESNKVMVPERPNLNFDKQVEDNPKVKEEI
SVDGESNQPFREDPSVVKKVINAGIILKEKKRIPEKDVNKVDKPTNAASSSPKRRKVVKT
VIDDRGREVTEVIWEGEETEAKKADSDIIKTADSDILKKSDNKAASAVNRPPAAKKSVGN
TAPTNATGKAGNKKGVNKDPKQGNILSFFKKV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctgggaatcatccaagacatcgaaaccctcgtatccgatcaacttcaagtg
gcttcgtacaagtggctgagtcgaaattactttgtgtcttccaatgctgcaaagaggtta
ctccaagagtttgttgaaaaacatggaaatgggttcgaagtggtgtatgttttggccggc
tggttgaagagcgatccttcgagctaccatataaggcttgtttctgggcctaaacttgca
gaagcaaaagaagaatttgatggcaactgctcagtcggggtttatagtgtgcaagcttgc
atcccaaaggatccagctgcactgtggaatgctgaatttgtgcaagcggaaaagctcttt
aagcaggctcctatggttgagaattgcttgagagataacaggttttgtgggatttccaat
tcctttgttaagcgtaatgtggacggagcaccattgagcactgaatctccgcaacttaac
tctgaggcagtaatagggcaaccagaaaattccaactgggggtcctcatccaattccaaa
agagaagcgaaatgggcgcaaatgagacgagaagatgaggagtctgatgaagaagttcaa
gtaaggcgtaacaaacaaaacatagcagcagccatggctgcggacatggagtgtcaacca
actaaggaacaacctcaatggggtggctctattgctggtcgctcttacaaaccacgaaac
agagcgatgatgcatgtcaatctgatgaacaactacttcgaccccaactcggtgtacacg
gaagaggatttcagacgtgatgtccaacaggctaacaaacgtcctgcagacaaagaaaaa
gtccagaatgagaatagctcctctgcttctggaggttcattggcgaatttctggggccag
gcatctgtgaagtcaaagtcagatgctccagagaaatataataattccattcctgatcat
actggagctagtgcagagcctcaaacttgtgctcgagaagcagtaacgggtagcagtgac
gatgatggtcaacaagttaattttaagagatcttccaacggtgggggcactcggaaaagg
agggttgtctttgatttctcagatgacgatgaagatgcagttaatttagcatcacgggag
attccaaaagggcaatcatgcctatatctgaaagaaagcaataaagttatggttccagag
agaccgaatttgaattttgacaagcaggtagaagataaccccaaggttaaggaagaaata
tctgttgatggggaatccaaccaacctttcagagaagatccttcagttgtcaaaaaagtg
attaatgctgggattatccttaaagagaagaaacgtattcctgaaaaggatgtgaacaaa
gtggataaacccaccaacgctgcttcaagttcaccgaaaagaagaaaagttgtgaagaca
gtgattgatgatagaggaagagaagtgactgaagtaatctgggagggtgaggaaacagaa
gcaaagaaagccgacagtgatataatcaagacagccgacagtgatatactcaagaaatct
gataataaagctgccagtgctgttaacaggcctcctgcagctaagaagtcagtgggaaac
acggctccaacaaatgcaacagggaaagcgggaaacaagaaaggagtaaacaaggatcct
aagcaaggaaatattctttcattcttcaagaaggtctaa
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