Malus sylvestris (European crab apple): 126614961
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Entry
126614961 CDS
T09027
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126614961
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
126614961
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
126614961
Prokaryotic type
126614961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
126614961
NCBI-ProteinID:
XP_050138628
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Position
3:complement(25999494..26006133)
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AA seq
994 aa
AA seq
DB search
MQMLIPQVTNLRLLFFSPFSCLSSLSPLTIKPYKPRSLFTALASSYRKRHRPLPNNQPPN
LRARNKSTLRESGGGKDKSMEEATEAKKADTAGFNKRRAEGNDKSDRPKKNLQRKVRSLN
PINTLSYVQILGTGMDTHDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFL
SRVCSETAGGLPGLLLTLAGMGEEGMSVNVWGPSDLKYLVDAMRCFIPNAAMVHTRSFGP
TLGSVGGFMDDQTKFKEPIVLVDDEVVNISAILLLPNFSKGTGLPNEVISTQNPTEKVLD
DRIGHASQPFRLNGNSRPNAKPGDMSVVYICELPEIKGKFDPEKAKALGLKPGSKYRELQ
LGNSVHSDFQNITVHPRDVMEPSIPGPIVLLVDCPTESHLEELVSIKCLSRYYVDFSGPP
ENAKGVTCVIHLGPASLISSPNYQSWMKRFGLAQHIMAGNERKNVEIPILRASARIAARL
NYLCPQFFPAPGFWSLQNLDCLAPESTASSEGSISKSCESISAENLLKFTLRPYARLGLD
RSVIPSQVASSEIIDELISEIPEVVDAAHCVSRFWYQSTETNGEISLTKGDEVLVEEPWY
NENTLPSCLENIRRDDLEIVLLGTGSSQPSKYRNVTSIHINLFSKGGLLLDCGEGTLGQL
KRRYGVEGADNAVRGLSCIWISHIHADHHTGLARILTLRRDLLKGVPHEPLLVVGPRKLK
FFLDAYQRLEDLDMQFLDCKHTTEASLLAFEGVTEPNRDYSSPASPTRFEDMSIKNTERQ
LAERVDSTLFAKGSRMQSYWKRPGSPIDNSVVPIVKSLQKVLNETGLEALISFPVIHCPQ
AFGVVLQASERLNSVGKMIPGWKVVYSGDTRPCPELIDASRGATVLIHEATFEDGMVDEA
VARNHSTTKEAIEVGNSAGVYRIILTHFSQRYPKIPVLDDTHMHKTCIGFDMMSINIADL
PVAPKVLPYLKLLFRDEMIVDEEDELIEAASVAS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcttattccacaagtcacaaacctccgtctcctcttcttttcccctttctct
tgtctctcctccctctctcctctcaccattaaaccctataaaccccgctctctcttcacc
gccctcgcttcctcctaccgaaaacgacaccgtcccctccccaacaaccaacctcccaac
ctccgcgccaggaacaaaagcactctcagggagagcggaggaggcaaagacaaatcaatg
gaagaggccacggaggctaagaaggctgacactgctgggttcaataagcgaagagctgag
ggcaacgacaagagtgataggccgaagaagaaccttcagcggaaagtgcgctcacttaat
cccatcaataccctatcttatgttcagatactagggactggaatggatactcatgataca
tctccttcagtgttgctattctttgacaaacagagatttatatttaatgctggagagggt
ttgcaaaggttctgcacagagcataagattaagttgtcaaagattgatcacatttttctc
tctcgtgtctgctcagagactgcaggtggacttccaggtttgctgttaactttggctggc
atgggtgaagaaggaatgtctgtcaatgtatggggtccgtcagatctcaaatatctggta
gatgccatgaggtgtttcatcccaaatgctgccatggttcacactcggagctttgggccg
actctcggttctgtggggggttttatggatgatcaaactaagtttaaagagccgattgtt
cttgttgatgatgaggttgtcaatatatcagccattcttctactcccaaatttctcaaaa
gggactgggctcccaaatgaagtaatcagtacacagaatccgacagaaaaggttcttgat
gataggattggtcatgcttcacaaccctttagactaaatggcaacagtagacctaatgca
aagcctggtgacatgtctgtcgtttacatctgtgaattacctgagattaaagggaaattt
gaccctgaaaaagctaaggctttgggtcttaaaccagggtcaaaatatcgggaactgcaa
cttggaaattcagtgcactcagattttcaaaatatcacggttcatccaagggatgtaatg
gaaccctccattcctggtccaattgtattacttgtagactgcccaacggaatctcatttg
gaggagctggtatccataaaatgtctcagtcgctattatgtggatttctcaggcccgcct
gagaatgctaagggtgtgacttgtgtcattcatctgggtcctgcatctctaataagcagt
ccgaactaccagagctggatgaagagatttggtttagcccaacatatcatggctgggaat
gaaaggaagaatgtggagattccaatcctaagagcaagtgcaagaattgcagctcgactt
aactatctatgtccacagttctttccagctccaggtttttggtctcttcagaaccttgat
tgtttggcaccagaatccactgcttcaagtgagggttccatttcaaagtcttgtgaaagc
atttccgctgaaaacctcctcaagttcacgttgcgtccatatgctcgccttggattagat
aggtctgttattccaagtcaagtggcttcctcagaaatcattgatgagttaatttcagag
attccggaggttgtagatgcagcccattgtgttagtcggttctggtaccagtctacagaa
acaaacggagagataagtttaactaaaggtgatgaagttttggttgaagagccatggtat
aatgagaatacgcttcctagttgtttggaaaatataaggagagatgacttggagatagtt
cttttagggactggatcatctcagccatctaaatatcgcaatgtcacttctatccatatc
aatcttttctccaaaggaggtttacttttagattgcggtgaaggaaccctgggacagctg
aaaagaagatatggtgtagagggtgctgataatgctgtgagaggtcttagctgtatatgg
atttctcatattcatgctgatcaccatactgggttggcaagaatacttactctacgacgt
gatttgttgaagggggtgcctcacgagccattacttgttgttggaccgagaaagcttaag
ttctttttggatgcataccagagactcgaagatttagatatgcagttccttgattgtaag
cacaccacagaagcgtctttacttgcttttgagggtgttactgaacccaatagggattac
tcttctccagcaagtccaacccgttttgaggacatgagcattaaaaatacagagaggcaa
ttagcggagagagttgattctactctatttgctaaaggatcccgtatgcagagctattgg
aagaggccgggtagtcctattgacaacagtgtagttccaattgtaaagagcttgcaaaaa
gtgctcaatgaaactggtttggaagccttgattagttttcctgtcatccactgtccgcag
gcatttggtgttgtcttgcaagcttcagagagattgaatagtgttggaaaaatgattcca
ggttggaaggttgtatactcaggtgacactaggccctgtccggaacttatagacgcatct
cgtggtgcaacagttctaatacatgaggcaacttttgaggatggcatggtggacgaggct
gtagcaagaaaccatagcacaacaaaggaagccatagaagttgggaactctgctggagtt
tatcgtatcatcctcactcacttcagccagcgatatcctaaaatcccagtacttgatgat
acacacatgcataagacatgcattggatttgacatgatgagtattaacattgctgatttg
cctgtggccccaaaggtacttccatacttgaaactgctttttagagacgagatgattgtt
gacgaggaagatgagttgatagaggctgcaagtgtggcttcttga
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