Malus sylvestris (European crab apple): 126615114
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Entry
126615114 CDS
T09027
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126615114
03036 Chromosome and associated proteins [BR:
msyl03036
]
126615114
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126615114
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
126615114
SLIK complex
126615114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
COG4_m
DpnD_N
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
126615114
NCBI-ProteinID:
XP_050138813
LinkDB
All DBs
Position
3:complement(22102545..22126026)
Genome browser
AA seq
1741 aa
AA seq
DB search
MAFFRNYSNDTVSRSVLEEKTLGQSVERIHSSTGNEDVDVNSYEKEFDINMDVQYQSEGE
HEDASRLHNEAAEDEVIGTKFSNLPTSGRRTAVAGKWGSTFWKDCQPMRSQGGSDSGQET
KSGLDYRNAIGSEDNSSDVKEDGIDFEDEGKPKVSKGQRGHSDIPADEMLSDEYYEQDGE
EQSESMRYRGFHHSIGSNSRPQSKPNSVSDRAHYRTSRNDIEDFEDGDDANEDLDAADAD
YEEDEDEDDPDDADFEPDSGVGSGRTAQKDKNWNGEDSDDDNDSDDELDVSDEDDSYYGK
KPKSRHRGNAKSTRERKSYHSSSRQRRGKSSFDDDESSAEDSESDSDEDFKSIKRKGVHT
RKKNGRRNVTGQNGEVRTSTRSVRKVSYVESDGSDEVEEGKKKKSQKEEIEEEDGDYIEK
VLWHQPKGMAEDALRNNRSTDPVLLSHLFDSEPDWNHMEFLIKWKGQSHLHCQWKSISEL
QNLSGFKKVLNYTKKVMEDARYRNTISREEIEVHDVSKEMDLDLIKQNSQVERIIADRIR
QDTSGDVGPDYLVKWQGLSYAEATWEKDVDIAFAQDAIDEFKVREAAMAVQGKMVDLQRK
RSKGSLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSML
GFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFNNDK
IVGRPVKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNK
LLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEIELANLHMELRPHIL
RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVEL
KKCCNHPFLFESADHGYGGDSSGKDGSKLERTILSSGKLVILDKLLMKLHETKHRVLIFS
QMVRMLDILAEYMSIRGFQFQRLDGSTKADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV
LDHLVIQKLNAEGRLEKKESKKGTLFDKNELSSILRFGAEELFKEEKNDEESKKRLLSMD
IDEILERAEKVEEKETAEEGNELLSAFKVANFGTAEDDGSFWSRWIKPEAVSQAEEALAP
RATRNTKSYAEADQPDRSNKRKKKESEPQERVQKRRKADYTVTSVPMIDGASAQVRGWSS
GNLSKRDALRFSRAVMKFGNESQIALIVEEVGGAVAAASTDAQVELFNALIDGCTEAVEV
GSLDPKGPLLDFYGVPVKAGDLLNRVRELQHLAKRISRYDDPVAQFRVLKYLKPSNWSKG
CGWNQIDDARLLIGIYYHGFGNWEKIRLDARLGLTKKIAPVELQHHETFLPRAPNLRDRA
NALLEMEIAALSGKNANVKVGRKASKEREATRNVSLARSGPKKGKTSSSRANFPTNKDRP
LKPQKVEPLVKEEGEMSDDDEVYEKFKEEKWMEWCEEMMKDETKTLNRLERLQMISANLP
KEKVLSQIRSYLQLLGRTIDQIVLENEKEPYGQDRMSMRLWNYVSTFSNLSGERLHQIYS
KLKQHQDVEAGPSHMNGSASGPFGRDNDSSPFSFHSDRQRGPDTAKFEAWKRRRRGEADS
NIQVQAQSQRNMNNGTRLTDPSSLGILGAGPSENKRAVNERPYRTRQTGLPTKQGFTSGI
K
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttttttaggaactattctaacgatacagtttcacgaagtgtcctggaagaaaaa
accctaggacaaagtgttgaaagaattcatagctccacagggaatgaagatgtggatgta
aattcttatgaaaaggaatttgatatcaacatggatgttcagtatcaaagtgaaggcgaa
catgaagatgctagtaggttgcacaatgaggcagcagaagatgaggttattggtacaaaa
ttttccaatttacccacttctgggaggagaacagctgtggctggaaagtggggttcaacc
ttttggaaggactgtcaacctatgcgctcacagggtgggtctgattctggtcaggaaact
aaaagtgggttggactacagaaatgctattggatctgaagataattcttcggatgtcaag
gaagatggaatcgattttgaagatgagggcaagccgaaagtaagcaagggacaacggggc
cattctgacatccctgcagatgaaatgttatctgatgaatattatgagcaggatggggaa
gaacagagtgaatcaatgcgctatagagggtttcatcactccattgggtcaaattctagg
ccacaatcaaagcctaattcagtcagcgaccgtgcacactatagaacttctagaaatgat
attgaagattttgaagatggtgatgatgccaacgaagatcttgatgctgctgatgctgat
tatgaagaagacgaagatgaagatgatcctgatgatgccgattttgaacctgattctggt
gttggaagtggtcgcactgcacagaaggataaaaattggaatggtgaagattctgatgat
gataatgatagtgatgatgagcttgatgtttcagatgaagatgattcttattatggaaag
aaacctaagagtaggcatcgtggtaatgctaaatctacaagggaacgcaaatcatatcat
tcatctagtcggcaaagaagagggaagtcatcgtttgatgatgatgagtcctcagcagag
gactccgaaagtgacagtgacgaggattttaaaagtattaaaaggaaaggtgtacatacg
cgcaagaagaatggccgaagaaatgttactggacaaaatggtgaggtacgaacttctact
aggtctgttaggaaggtctcatatgttgaaagtgatggaagtgatgaagttgaagaagga
aagaaaaagaagtcccagaaggaggagattgaagaagaggatggtgactatattgaaaag
gtgctttggcatcagcctaagggcatggctgaagatgctctgaggaacaatagatcaacg
gatcctgtgctattaagtcacttgtttgattctgagccagattggaatcatatggagttc
ttgataaaatggaaagggcagtcccatttgcactgtcaatggaaatcaatttccgagcta
caaaatcttagcggttttaagaaggttttaaattacactaaaaaggtgatggaagatgcc
aggtacaggaacacaatatcacgtgaggagattgaggttcatgatgtgagcaaggaaatg
gacttagatctcatcaagcagaatagtcaggtggagagaataattgcagaccgcatcagg
caagatacctctggcgatgtgggtccggattatctagtcaagtggcaaggattgtcttat
gctgaagcaacatgggagaaggatgtagatattgcgtttgcacaagatgctattgatgag
ttcaaggttcgtgaagctgcaatggctgtacaagggaaaatggtggatctccagcgcaag
aggagcaaaggaagtctaaggaagctcgaggaacaacccgaatggttaaagggaggaaag
cttcgtgattatcagcttgagggtttgaattttcttgttaatagttggaggaatgatacc
aatgtcattttagctgatgaaatgggtcttggtaaaacagttcaatcagtttcaatgctt
ggttttttacagaacgctcaacagatccacgggccatttcttgttgttgtaccattatcc
acgttgtctaactgggccaaagaatttaggaagtggctccctgatatgaatattattgtg
tatgttggtactcgtgcaagccgagaggtttgtcagcagtatgaatttaataatgataaa
atagttggccggcctgttaaattcaatgcactattgactacgtatgaggtggttttaaag
gataaggctgttctttccaagatcaagtggaattatctaatggttgatgaagctcataga
ttaaagaacagtgaggcacagttgtacacaaccctcttggaatttagcacaaagaacaag
ttgcttataactggtactcccttgcagaacagcgtagaggagttatgggctctgcttcac
ttcctcgaccctgataaattcaagaataaagatgattttgttcagaattacaaaaatctc
agttcattcaatgagattgagcttgctaatctgcatatggaattgaggcctcacattctt
cgaagagttatcaaggatgtggaaaagtctttacctcctaaaattgagcggattcttagg
gttgaaatgtctcctcttcagaaacagtattataagtggattttggaacgcaactttcat
aacttgaacaaaggagttcgtgggaatcaggtttccttgttgaatattgtggtagaattg
aagaaatgttgtaatcatccctttctgtttgaaagtgctgaccatggttatggtggggac
tcaagtggtaaagatggcagtaaattggagaggactattttaagcagcggaaagttggtt
atactcgataagcttcttatgaaattgcatgaaacaaagcaccgtgttctcatattttcc
cagatggtaagaatgttggacatactggcggagtacatgtcaattagaggttttcaattt
cagcggcttgatggaagtacaaaggctgatttacgccaccaagcaatggaacattttaat
gcgcctggtagtgaagacttttgcttcctcctttcaactcgagcaggtggccttggtatc
aaccttgccacagcggatacggttataatattcgactcagattggaatccccaaaacgac
ctgcaggcaatgagcagagctcacagaatagggcaacaagaagttgttaacatctataga
tttgtcacaagcaaaagtgtcgaggaagatatcctggagagagctaagaaaaagatggtg
cttgaccatttggtgattcaaaaattaaatgcagagggtaggttggaaaagaaagaatct
aagaaagggactttatttgacaaaaatgagctgtcttctattctacgattcggggctgag
gaacttttcaaggaagaaaaaaatgatgaagaaagcaagaaaagactcttaagtatggat
attgatgagattcttgaaagagcagaaaaggttgaagagaaggaaactgcagaggaaggg
aatgaattgttgagtgcttttaaggttgcaaattttggtactgctgaagatgatggtagt
ttttggagtcgttggataaagcctgaagcagtatcccaagccgaagaagctcttgctcct
cgtgccactaggaatactaagagctatgcagaagctgatcagcctgatagaagtaataaa
agaaaaaagaaagaatctgagcctcaggaaagagtccagaaaagacggaaagcagattat
acagtcacctcagtgcccatgattgacggagcatctgctcaagttaggggatggtcttct
gggaacttatccaagagagacgcattgcgattttctcgtgctgttatgaaatttgggaat
gagagccaaattgccttgatagttgaggaggtcggtggtgcagttgcagcagcttcaact
gatgcacaggttgagcttttcaatgcattgattgatggctgcacagaagcagtggaagtg
gggagtctggacccgaaggggccattgctggatttttatggtgtccctgtcaaagctggt
gatctgctcaaccgtgttcgtgaacttcaacacctggcaaaacgcattagtcgatatgat
gatcccgttgctcagtttcgtgtcttgaagtacctcaaaccttcaaattggtcgaaaggt
tgtggctggaatcaaattgatgatgcaagattgcttattggaatatactaccatggcttt
ggaaattgggaaaagatacgtttagatgcaaggcttggccttacaaagaaaattgctcca
gtggaacttcaacaccatgaaacatttttaccccgtgctccaaatttgagagatcgggct
aacgctcttttggaaatggaaattgcagctcttagtggaaagaatgcaaatgttaaagtg
ggtcgtaaggcttcaaaggagagggaagctactcgcaatgtttctttagctcgcagtggg
ccaaagaaaggaaaaaccagttcttctagagctaattttccaacaaacaaggacagacca
ctgaaaccccagaaagttgaacctttagtgaaagaggagggtgaaatgtcagacgatgat
gaagtgtatgagaagtttaaggaggagaaatggatggaatggtgtgaagagatgatgaag
gatgaaactaaaaccttaaatcgtcttgaacggttgcagatgattagtgccaatctccca
aaggaaaaggtgctttcccagattcgaagttatttacagcttcttggacgaacgatagat
caaattgttttagaaaatgagaaggaaccttatggacaagataggatgagcatgcgcttg
tggaactatgtttctaccttttcaaatctgtccggggagagacttcatcaaatctattca
aaacttaaacagcaccaggatgtggaggctggcccttcccacatgaatggctctgcttct
gggccctttggcagagacaatgactcttctcccttctccttccattcggacaggcaaaga
ggtcctgatacagcgaagtttgaagcatggaaacgaaggaggagaggggaagctgatagc
aatatccaagttcaggcccaatctcaaagaaatatgaataatggtacccgattaactgat
ccaagctcattagggattcttggtgcaggaccgtcagaaaataaacgcgctgtgaatgaa
aggccttataggacacggcagacaggtttaccaacaaaacaaggtttcacatcaggtatt
aagtag
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integrated database retrieval system
