KEGG   Malus sylvestris (European crab apple): 126615311
Entry
126615311         CDS       T09027                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126615311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126615311
Spliceosome [BR:msyl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    126615311
 Complex B
    126615311
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus Autophagy_act_C zf-CCCH_4
Other DBs
NCBI-GeneID: 126615311
NCBI-ProteinID: XP_050139085
LinkDB
Position
3:13669617..13673419
AA seq 315 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTILLSNMYQRPDMITP
GVDAEGQPIDPRQMQRHFEEFYEDLFLELSKYGDIESLNVCDNLADHMVGNVCVQFREEE
HAANALRNLSGRFYAGRPIIVDYSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIGREL
RRELFGSYKRRHSRSRSRSRSPYGHRSYEERSHRSRGHSRRYDDEDRYPESWSRRNKTVS
PGRRKGRSRSRSPGRRRRNQSPVREGSEERRAKIEQWNREREQDENASKVNIDRSNINGH
AQMEQQNNGREEQQQ
NT seq 948 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcttcgatattcgggacggagaaggaccgagtgaactgccctttc
tacttcaaaattggggcgtgtaggcacggcgaccgctgctccagactccacaccaagccc
agcgtcagccccacgatcttgctctccaacatgtaccagcgacccgatatgatcaccccg
ggcgtcgacgccgagggccagcccatcgacccccgccagatgcagaggcactttgaggag
ttttatgaggatttatttctcgagttgagcaagtatggcgacattgaaagtctgaatgtc
tgcgacaacctagccgaccacatggtgggcaatgtgtgtgttcagtttagggaggaagaa
catgctgcaaatgcgcttcggaacctgagtggaagattttatgctggtcgtcctatcatt
gttgactattcaccggtgacagacttccgtgaagccacctgcaggcaatatgaggagaac
acatgcaaccgtggtggatactgcaattttatgcacctgaaaaggattggcagggaattg
aggcgtgaattatttgggagctataagagaaggcatagccgcagtcgaagcaggagtcgc
agcccttacgggcatcgtagctatgaagagcgctctcaccgtagccggggtcatagcaga
aggtatgatgatgaggatcgctatcctgaaagctggagccggaggaacaagactgtaagc
cctggtcgaaggaaaggacgcagtagaagtagaagccctggaagaagaagaagaaaccag
agtcctgttagagaaggaagcgaggagagacgggcaaaaattgagcagtggaacagggaa
agagaacaggatgaaaatgctagtaaggtcaatattgaccgaagcaacattaatgggcat
gcacaaatggaacaacagaacaatggccgtgaggaacagcaacaatag

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