Malus sylvestris (European crab apple): 126615326
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Entry
126615326 CDS
T09027
Name
(RefSeq) E3 SUMO-protein ligase MMS21-like
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126615326
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126615326
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
126615326
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
126615326
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-C3HC4_2
zf-MIZ
zf-RING_UBOX
zf-RING_2
DUF2784
Motif
Other DBs
NCBI-GeneID:
126615326
NCBI-ProteinID:
XP_050139101
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All DBs
Position
3:30712018..30715154
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AA seq
245 aa
AA seq
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MASTSRTHGVTGRIRTATANLHEDNQSLISDIGKAFSLMKEIAVDFESAKQFEKVKELEN
AVVELVATYEDCSHFSSAIESVGHKYQPGPELTDFDKLFKNEVAQLKANSSSVPQNHPLI
RQFREVVWKVHHAGEPMPGEEQEDIVMTSNQSTILNVTCPLSGKPVTELEHPVRSVVCKH
VYDKGHIMHYLRENNTRCPVAACPAKLKSDKVKDDPLLAADIDELRKTQNQNVMTDVMDV
TEFEE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacctctcgcactcatggcgtcacgggccggatccgaaccgccacggccaat
ctccacgaggacaaccagtctcttatctccgatattgggaaagctttcagtttgatgaag
gaaattgcagtcgatttcgagagtgctaagcaatttgagaaggtgaaggagctcgaaaat
gccgttgttgaattggtggctacttatgaagactgttcacatttttcgtcagcaattgaa
tctgttggacataaataccaacctgggcctgagcttactgatttcgataagttgttcaag
aatgaggttgcacagctgaaggcaaactcatcttcagttccccaaaaccatcctctgata
cgtcaattccgggaagttgtctggaaagtccatcacgcaggagaacctatgccaggtgaa
gagcaggaggacattgtaatgacgagcaaccaaagcactattttgaatgtcacttgtcca
ttaagtggaaagcctgtcactgaactggagcatccagttcgcagtgtcgtatgcaagcat
gtttacgacaaaggacatatcatgcattacttacgggaaaacaacacacgatgccctgtt
gcagcttgccctgcgaaattgaagtcagataaagtgaaggatgatccactgttagccgct
gatattgatgaattgcgtaaaacgcagaatcagaatgtcatgactgatgtgatggacgtc
actgagtttgaagagtga
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