Malus sylvestris (European crab apple): 126615726
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Entry
126615726 CDS
T09027
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126615726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126615726
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126615726
03012 Translation factors [BR:
msyl03012
]
126615726
04131 Membrane trafficking [BR:
msyl04131
]
126615726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126615726
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
126615726
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
126615726
Translation factors [BR:
msyl03012
]
Eukaryotic type
Elongation factors
126615726
Membrane trafficking [BR:
msyl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
126615726
Exosome [BR:
msyl04147
]
Exosomal proteins
Proteins found in most exosomes
126615726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
FlpD
GTP_EFTU_D4
SRPRB
Semialdhyde_dhC
AAA_22
Motif
Other DBs
NCBI-GeneID:
126615726
NCBI-ProteinID:
XP_050139562
LinkDB
All DBs
Position
3:9995217..9997908
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAILIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEAMLEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGQGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKITKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagttccatatcaacattgtggtcattggccatgtcgactctggcaag
tcaaccaccactggccacttgatctacaagcttggtggtattgacaagcgtgtgatcgag
aggttcgagaaggaggctgctgagatgaacaagaggtcattcaagtatgcctgggtgttg
gacaagctcaaggctgagcgtgagcgtggtattaccattgatattgccttgtggaaattt
gagaccaccaagtactactgcactgtcattgatgctcctggacatcgtgactttatcaag
aacatgattacgggaacctcccaggctgactgtgccatcctcatcattgactccaccact
ggaggttttgaagctggtatttccaaggatggtcagacccgtgagcatgctttgcttgct
ttcactcttggtgtcaagcaaatgatttgctgctgcaacaagatggatgccaccactccc
aagtactcgaaggcaaggtacgaagaaattgtgaaggaagtgtcgtcctatctcaagaag
gttggctacaacccagataagattccctttgtccccatttctgggtttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggtcccacccttcttgaggctctt
gaccagatcaacgagcccaagaggccctcagacaagcccctccggcttccacttcaggat
gtgtacaagattggtggtattggtaccgtccctgttggacgagttgagactggtgtcatt
aagcctggtatggtggtgacttttggcccaactgggctaactactgaggtcaagtctgtt
gagatgcaccacgaagctatgctggaggcccttccaggtgataatgttggattcaacgtg
aagaatgttgctgtcaaggatctcaagcgtggttatgttgcttccaactccaaggatgat
cctgcaaaggaggctgctaactttacctctcaggtcatcatcatgaaccaccccgggcag
attggacagggatatgcaccagttctcgactgtcatacctcccacattgctgtcaagttt
gctgagcttgtgacaaagattgacaggcgatctggcaaggagctcgagaaggagcctaag
ttcttgaagaatggtgatgccggatttgtgaagatgattccaactaagcccatggttgtc
gagaccttctctgagtacccaccactcggacgttttgctgtgagggacatgcgccagact
gttgcagttggtgtcatcaagagcgttgagaagaaggatccaactggagctaagatcacc
aaggccgccgctaagaagaagtga
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