Malus sylvestris (European crab apple): 126615885
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Entry
126615885 CDS
T09027
Name
(RefSeq) autophagy-related protein 18a-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126615885
Membrane trafficking [BR:
msyl04131
]
Autophagy
Other autophagy associated proteins
Others
126615885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
BCAS3_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
126615885
NCBI-ProteinID:
XP_050139768
LinkDB
All DBs
Position
3:complement(35465044..35468044)
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AA seq
454 aa
AA seq
DB search
MATLSAFSPPSWPDPNSAADFLTDPTDPTDDNPTSVVDSSDDHHDHQSPPNPNHNLHNNH
PFSSSPPEPAPPAPRSPPSLFHVCFNQDHSCFAVGTDHGFRIYNCDPFRELFRRDFDNGG
GIGVVEMLFRCNILAIVGGGPDPQYPTNKVMIWDDHQERCIGELSFRSVVRSVRLRRDRI
VVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQVARSLVLVCPGLQKGQVRVEHYAS
KRTKFIMAHDSRLACFALTPDGQLLATSSNKGTLVRIFNTLDGTLLQEVRRGADRAEIYS
LAFSSTAQWLAVSSDKGTVHVFNLKVNSGSSGNENTRSASDPNLVVSSSNSSLSFIRVLY
TGKRHIMLLSLRPMDLSEACISGVLPKYFSSEWSVAQFRMLEGSQYIVAFGHQKNTVVIL
GMDGSFYRCEFDPVNGGEMTQLEYHNFLKPEEAF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctctccgccttctcgcctccctcctggcccgacccaaactccgccgccgac
ttcctcaccgatcccaccgatcccaccgacgataatcccacctctgtcgttgactccagc
gacgaccaccacgaccaccaatcgcccccaaaccctaaccacaacctccacaacaaccac
ccattctcctcctcgcccccggagcctgccccgccggcgccgcgctcgcctccgtctctg
ttccacgtctgcttcaaccaagaccactcctgcttcgccgtggggacagaccacgggttc
cggatctacaactgcgacccgttccgcgagctcttccgccgcgacttcgacaacggcggc
ggaatcggcgtcgttgagatgctattccgctgcaacatcttggccatagtcggtggtggg
cccgaccctcagtacccgaccaataaagtcatgatctgggacgaccaccaggagcggtgc
atcggtgagctgtcgttccgctccgtcgtccggtcggtgcggctccggagggaccgtatc
gtcgtcgttttggagcagaagatattcgtgtacaatttcgccgacctgaagctgctgcac
cagattgaaacgatcgcgaaccctaaggggctgtgcgcggtgtcgcaggtagcgaggtcg
ctggtgctggtgtgccctgggctgcagaaggggcaggttagggtggagcattacgcgtcg
aagcggaccaagttcattatggctcacgattccagacttgcctgctttgcactcacgcca
gacggccagctgctcgccacttccagcaacaaagggactctcgttcggattttcaatact
ctcgacggaactttgctacaagaggtaagaaggggtgcagacagagcagaaatctatagt
ttggcattctcttcaactgcccagtggttagcggtctcaagtgacaagggaacggtccat
gtttttaacctcaaggttaattctggatcctctggaaatgagaatacccgaagtgcatct
gatcctaatcttgtggtttcatcatcaaactcttctctttctttcatcagagtcttgtac
acaggcaaacgacatattatgcttctcagtctcagaccaatggatctgagcgaggcttgc
atttcaggtgtgctgcccaagtattttagctcagagtggtcggttgctcagtttcgcatg
cttgagggttctcagtacattgttgcgtttggtcaccaaaagaatactgtggtgattctt
ggcatggatgggagcttctatcgatgcgagttcgacccagtgaacggaggagagatgacc
cagctggaataccacaactttctaaagccagaagaagccttttga
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