Malus sylvestris (European crab apple): 126615930
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Entry
126615930 CDS
T09027
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126615930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126615930
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126615930
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
U-box type E3
126615930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Neurochondrin
zf-RING_UBOX
zf-C3HC4_4
HEAT_EZ
KAP
Arm_2
zf-Nse
zf-C3HC4_2
MCAfunc
zf-C3HC4
zf-RING_2
Fer4_12
NGO1945_C
Motif
Other DBs
NCBI-GeneID:
126615930
NCBI-ProteinID:
XP_050139813
LinkDB
All DBs
Position
3:8431139..8436941
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AA seq
666 aa
AA seq
DB search
MAEIGGDPAMEEDRGALVQSLIDTINEIASISDYRCVVKKQYCNLARRLKLLTPMFEEIR
DSKEEVSQDTLKALLSFMEALESAKELLRFGGESSKIYLVLEREQIMMKFHEVTARLEQA
LSGLSYENLDISDEVKEQVELVLAQFRRAKGRFDSPDVELYEDLLSIYSKNEAATDPTVL
RRLVDKLELTGIAELTQESLALHEMVTFSGGDPGESIEKMSMLLKKIKDFVQTENPDMDK
NILASCSGQASTDKNHKVPPVIPDDFRCPISLELMKDPVIVSTGQTYDRSCIERWLEAGH
GTCPKTQQSLSNTLTPNYALRSLIAQWCEANGIEPPKRPNSRPNKTASACSPAEHTKIEI
LLHKLMSVNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVT
ALLNLSICEDNKGSIISSGAIPGIVHVLKNGGMEARENAAATLFSLSVVDENKVRIGASG
AIPPLVKLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVSTLMKLLTEPGGGMVDE
ALAILAILSSHPEGKAAIGAAEAVPVLVEVIGTGSPRNRENAAAVLVHLCSGDQQHIIEA
QKLGVMSLLLELAQNGTDRGKRKAAQLLERMNRFAEQQMQAQAQAQAEAQPETQSHPPTT
TNAIDR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatcggtggcgacccagctatggaggaagacaggggtgctctggtgcagagc
ctgatcgacacgatcaacgaaatagcttcgatctccgactacaggtgtgtggtcaagaag
cagtactgcaatttggcgaggaggttgaagctgctgaccccaatgttcgaggagattagg
gatagcaaggaggaggtctctcaggacactctgaaggccttgctttcgttcatggaagct
ctggaatcggccaaggagctgctcagattcggaggcgagagcagcaagatttacctggtt
ttggaaagggagcaaattatgatgaagtttcatgaggtgacagctcgattggagcaagct
ttaagtggactttcctatgaaaatcttgacatatctgatgaagttaaggaacaggttgag
cttgttcttgctcagtttagaagagccaaaggaaggttcgattcgcctgatgttgagctc
tatgaagatctcttgtccatttacagtaaaaatgaggcagcaacagatccaactgtccta
agaagattggttgataagttagaattgacagggatagctgaactgacacaagaatcacta
gccttgcatgagatggttactttcagtggtggggatcctggggagagcatcgagaagatg
tcaatgctactgaaaaaaattaaggattttgtacaaacagaaaaccccgacatggataag
aatatattagcaagttgcagtgggcaagcatccactgataagaatcacaaagtcccccca
gttataccagatgattttcgttgtccaatatctttggagttaatgaaggatcccgtcatt
gtttcaacagggcagacatatgatcgttcctgtattgagaggtggctggaagcaggtcat
gggacatgtccaaaaacacaacagagcctctctaacaccctcactccgaactatgcttta
cgtagcctcattgcccagtggtgcgaggcaaatggcattgaaccaccaaaaagacccaat
tctcgacctaataaaactgcatccgcctgctcgccagcagaacacactaagattgaaatt
ctcctccacaagctgatgtcagtaaaccccgaagaccaaaggtctgctgctggtgaaatc
cgccttcttgccaaacgtaatgcagataatcgtgtggctattgctgaagctggtgcaata
cccctgcttgtaggcctcctttcaacccctgactcccgcacccaagagcatgctgtgaca
gcactcctcaacctttccatatgtgaggataacaaaggaagcatcatctcatctggagca
attcctggtattgttcatgtcctcaagaatggagggatggaagcacgggaaaatgcagct
gcgacccttttcagcctttctgttgtggatgaaaataaggttagaattggtgcttcagga
gctattccgccacttgttaaattgctgagtgaaggtacccaaagggggaagaaagatgct
gcaactgcactttttaacttgtgcatttatcaaggtaacaaggggaaggcagtaagggcc
ggtgttgtttcgaccctaatgaagctgctgacagaacctggaggtggaatggtggatgaa
gcacttgccattctagcaatattgtctagccaccctgaagggaaagcggccattggagct
gctgaggctgtgcctgttttggttgaagttattgggactggatctccccgaaacagagaa
aatgcagctgcagttttggtgcatctttgttctggagaccaacaacatataatagaggct
cagaaactcggggtgatgagtttgttattggagttggcacaaaatggcacagatagaggc
aagagaaaggctgcgcagttacttgagcgaatgaatcggtttgctgagcagcagatgcag
gcgcaggcccaggcacaagccgaggctcagcctgagacccagtcacatccacccactact
acaaatgccattgacagatga
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