Malus sylvestris (European crab apple): 126616070
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Entry
126616070 CDS
T09027
Name
(RefSeq) (-)-germacrene D synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
126616070
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
126616070
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Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
Motif
Other DBs
NCBI-GeneID:
126616070
NCBI-ProteinID:
XP_050139988
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Position
3:complement(27187787..27194634)
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AA seq
561 aa
AA seq
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MSSPSQAHTSKKIPSDVNRRSANFPPNFWGDYFLSYASVEKNIEAEKLVQELKENVKRMI
LAPTPCKHSDKLDLVDTIQRLGVSYHFEDEIDEVLQQIRKDSYDGSHQHQGRDDDHNLHA
DALYFRLLRQQGYDISCEMFNKFKDDEGKFKESLVNDVIGLLSLYEATQLRVHGEDILEE
ALTFTTTHLKSVENRLSSPLSKLVTHALYQPFWKGNPRLEARRYLSIYQEDDSHNETLLT
FAKLDFNLLQQVHQKELSEISRWSKDLDFVSKLPFARDRIVESYLWGLGCYFEPQYDFAR
MTLSKVIGLIVGIDDIYDVYGTFEELELFTEAVERWDISAMDRLPQYMKVCYQAMLDSYT
EMEEKLRNEGNLYRIHYAREAMKVLVRGYMREAKWFHRKYTPTLDEYLSAALDTSSFSLA
VTSFIGMGDIVTKDSLDWVFSDPKILKAASLIGRLKNDIKSHQFEQKRGHVASAVECYMK
QYDVAEEEATLGLSKQVNNAWKDINEALLHQTTTIPMPLLLRILNLTRVVEVLYKHGDAF
TNTGTFLKDIVVSLLVEPVHL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccatctcaagctcatacctcaaaaaaaattcctagtgatgttaatcgacgt
tcagctaattttccccccaacttttggggagattattttttatcatatgcttcagtggaa
aaaaatattgaagctgagaaacttgtccaagaattaaaggaaaatgtgaagagaatgata
ttggctccaacgccttgtaagcattcagataagctggacttggtcgatacgattcagcgc
ttaggtgtctcctaccattttgaggatgagattgatgaagttttgcagcaaattcgcaag
gattcttatgacggtagtcaccaacaccaagggagggatgatgatcacaaccttcacgca
gatgctctatattttcgattgcttagacaacaaggttatgatatatcatgtgaaatgttc
aacaagtttaaggacgatgaaggcaaatttaaggagtcacttgtcaatgatgtcatcgga
ctattaagcttgtacgaagcaacacagctaagggtacacggtgaggatatactagaagag
gcattaaccttcaccaccactcatttgaagtcggtagaaaatcgtttgagctccccgctt
tcgaaactcgtaactcatgcattgtaccagccgttttggaagggcaacccaaggctagaa
gcaaggcgttacttgtccatttaccaggaagacgattcacataatgaaactctcttaact
tttgcaaagttggatttcaatctcttgcagcaagtccatcagaaagaactaagtgaaatt
tcaaggtggtcgaaggacttggattttgtaagcaaactaccttttgcaagagacagaatt
gttgagagctacctttgggggttagggtgctactttgaacctcaatatgactttgctcgg
atgacattaagcaaagtaattggccttattgtgggtattgatgacatctatgatgtctac
ggcacatttgaagaactagagctctttactgaagctgttgagaggtgggatatctctgcc
atggatcgtctgccacagtacatgaaagtttgctatcaggcaatgttggattcatacaca
gaaatggaagaaaagcttcgaaatgaggggaacttatatcgaatccactatgctagagaa
gcaatgaaagttctagttagagggtacatgagggaagccaaatggttccatcgcaaatac
acacctacactggatgaatatttgtcagcagcacttgatacatcctccttttccctagca
gtcacgtcttttattggaatgggagatattgttacaaaagactcattggattgggttttc
agcgaccctaagattttaaaggctgcatccttaattggtagactcaagaatgacatcaag
tcccaccagtttgaacagaagagaggacacgttgcctcggccgtggaatgctacatgaaa
caatatgatgtcgcagaagaagaagcaacacttggactaagtaaacaagtgaataatgca
tggaaggacataaacgaagcgttgctccaccaaaccaccacaatccccatgcctctcctg
ttgcgaattctcaatcttacacgagtggtcgaagtgttatacaagcacggtgacgcattt
actaatactggaacttttctcaaggatattgtagtttctctgcttgtcgaaccggtgcat
ctataa
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