Malus sylvestris (European crab apple): 126616205
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Entry
126616205 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126616205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126616205
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126616205
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
126616205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
Motif
Other DBs
NCBI-GeneID:
126616205
NCBI-ProteinID:
XP_050140181
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All DBs
Position
3:957414..961532
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AA seq
308 aa
AA seq
DB search
MSPGGRFFEDVAESHVAFADSDVATSTADLRASPFRKAAPGLFGNPGMPPNSNVHDLLEC
PVCMNLMCPPIHQCPNGHTLCSSCKVRVHNCCPTCRNELGNIRCLALEKVAESLDLPCRH
QIYGCQDIFPYYSKLKHEKTCKYRPYSCPYAGAECSVTGDIQFLMMHLKNDHKVDMHDGS
TFNHRYVKSNPQEVENATWMLTIFNCFGRQFCLHFEAFHIGTAPVYMAFLRFMGDDDEAK
QFTYSLEVSGSGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGNRQELKLKV
AGRIWKEH
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctggaggtcgcttctttgaggatgtggccgagtctcatgtggcatttgcagat
tctgatgttgcaacttccactgctgatctaagggcttctccattcagaaaagcggcccct
ggtttgtttggaaatcctggaatgccaccaaatagtaatgtgcacgacctactcgagtgt
cctgtttgcatgaatttaatgtgtcctccaattcatcagtgtccaaatggccatactctc
tgctcgagctgtaaggttagagtgcacaactgttgccccacttgccggaatgaacttgga
aatataaggtgcttggcactggagaaagtagcagagtcgctggatcttccttgtagacac
caaatttatggttgccaagatatattcccatactacagcaagctgaagcacgagaaaacc
tgtaaatatcgcccgtacagctgcccttatgctggagctgaatgttctgtcactggagat
atccaattccttatgatgcatcttaaaaatgatcacaaggtcgacatgcatgacgggagt
actttcaaccatagatatgtcaaatccaatccccaagaagttgaaaatgctacatggatg
ttgacaattttcaactgttttggccgtcagttttgcttgcattttgaggctttccacatt
ggaactgcacctgtttacatggccttcctaaggtttatgggtgacgatgatgaggcgaag
caattcacttatagtcttgaagttagtggcagtggcagaaagcttacatggcaaggaatt
ccccggagtatccgagatagccaccgaaaggtccgtgacagtcaagacggattaatcatt
cagagaaacctagcactcttcttctcgggtggcaataggcaggagttgaagctgaaagtc
gccggacgtatatggaaagaacactga
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