Malus sylvestris (European crab apple): 126616229
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Entry
126616229 CDS
T09027
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126616229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126616229
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msyl03037
]
126616229
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126616229
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
126616229
Chromatin remodeling factors
SRCAP complex
126616229
INO80 complex
126616229
INO80 complex (yeast)
126616229
SWR1 complex
126616229
ASTRA complex
126616229
Cilium and associated proteins [BR:
msyl03037
]
Motile cilia and associated proteins
Dynein assembly factors
126616229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_18
AAA_19
Mg_chelatase
bpMoxR
AAA_25
Cdc6_lid
DnaB_C
TsaE
AAA_28
AAA_7
IstB_IS21
AAA_11
nSTAND3
NPHP3_N
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
126616229
NCBI-ProteinID:
XP_050140201
LinkDB
All DBs
Position
3:16581220..16586185
Genome browser
AA seq
458 aa
AA seq
DB search
MDKVRIEEVQSTTKKQRIATHTHIKGLGLEANGRAIPWAAGFVGQGEAREAAGLVVDMIR
QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELTPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDLLDRL
VIIRTQTYGLEEMIKILVIRAQVEELAIDDDSLAYLGEIGQKSSLRHAVQLLSPASIVAK
MNGRDKICKADLEEVGTLYLDAKSSAKVLQEQQEKYIT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtgaggatagaagaggttcagtcgactaccaagaagcagcgcatagccact
cacacccacatcaaaggccttggtcttgaggccaatggaagagcaataccttgggctgct
ggctttgtgggtcagggggaagcaagagaagctgctggccttgttgttgatatgatacgg
cagaagaagatggctggtcgggcacttctacttgctggacctcctggaacaggaaagaca
gcgctggctcttggaatatctcaggagcttgggagtaaggttccgttctgcccgatggtt
ggatcagaagtatactcatcagaagttaagaaaactgaggttttaatggaaaattttaga
cgggctattggtctacgtatcaaggaaaataaagaggtgtatgaaggagaggtgacggaa
ctcacaccagaagaaacagagagtgtaaccggtggttatggtaaaagcattagtcacgtc
atcattggattaaaaactgttaaaggaactaagcaactgaagttggaccccactatttat
gatgcattgattaaggaaaaggtagctgttggtgatgttatatacattgaagcaaatagc
ggagcagttaaaagagttggtagaagtgatgcttttgctacagagtttgatctggaagca
gaagagtatgtaccacttccaaaaggagaggttcacaaaaagaaggagattgtgcaggat
gtaacactacatgatctggatgctgcaaatgcgcggcctcaaggtgggcaagacatttta
tctctaatgggtcaaatgatgaagccgaggaaaacagaaattactgacaagttgcgacaa
gaaataaataaggttgttaaccggtatattgatgaaggtgtagcggaacttgtgcctgga
gttctgttcattgatgaggtacatatgctggatatggagtgcttttcatacttgaaccgt
gctttggagagctcgttatctccaatcgtaatatttgccaccaatagaggaatttgcaat
gtaagagggactgatatggctagtcctcatggaattcccgttgacttgttggaccggttg
gtgattatccgaacacagacttacggtcttgaagagatgataaagatcttagtaattcgt
gcacaagtagaggaactggctatagatgatgacagtttggcttacctcggagagatagga
caaaaatcatctttaaggcatgctgttcagctcttatcgcctgcaagcattgtggcaaaa
atgaatggcagagacaaaatatgcaaggctgacctagaggaggtgggtacgctttatctg
gatgccaagtcttcggcaaaggttcttcaagagcagcaggaaaagtacattacataa
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