Malus sylvestris (European crab apple): 126616233
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Entry
126616233 CDS
T09027
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP71-like
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126616233
03110 Chaperones and folding catalysts [BR:
msyl03110
]
126616233
Enzymes [BR:
msyl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
126616233
Spliceosome [BR:
msyl03041
]
Complex C
Other components
PPlases
126616233
Chaperones and folding catalysts [BR:
msyl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
126616233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
Beta-prop_THOC3
WDR55
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_2nd
WD40_Gbeta
VPS11_N
Motif
Other DBs
NCBI-GeneID:
126616233
NCBI-ProteinID:
XP_050140205
LinkDB
All DBs
Position
3:14209067..14217827
Genome browser
AA seq
636 aa
AA seq
DB search
MEETQNGGETLPTDAEESQNGNASSAVVETEEEPMVGPGPPPPPRARPKRPLQFEHAYLD
ALPSAQMYEKSYMHRDVVTHVAVSSADFVVTGSVDGHLKFWKKKAIGIEFAKHFRSHLGP
IEGLAVSVDGLLCCTISNDKSVKIYDVVNYDMMVMIRTEFVPGAVEWVYKQGDVKARLAI
SDRDSSYVHIFDARSGTNEPIISREVHLGPVKVMRYNPVFDTVISADQQGMVEYWTPDTL
KFPETGVKFRMKSDTNLFEIPKCKTTVSSIEVSPDGKQFSITSPDRRIRVFWFSTGKLRR
VYDESLEVAQDLQRSDVPLYQLEAIDFGRRMAVEREIEKTESAPQPNAVFDESSNFLIYA
TLLGIKVVNLHTNKVSRILGKVENNDRFLRIALYQGDKSSKKVRKIPAAAANVNESKEPL
TDPTLICCAFKKHRIYLFSQREPEEPEDATKGRDIFNEKPPADELLAASEIGKSSTTSLP
DNVILRTTMGDIHMKLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDG
TGGQSIWGREFEDEFHKSLRHDRPFTVSMANAGENTNGSQFFITTVATPWLDNKHTVFGR
VIKGMDVVQAIEKVKTDRGERPQVDVKILNVTVPKP
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaactcagaacggaggagaaaccctaccaacagacgcagaggaatcccagaac
ggcaacgcgagctcggccgtggtggagaccgaggaggagcccatggtgggtcccggccca
cccccaccccctcgcgctcgacccaagcggcctctccagttcgagcacgcctacctcgat
gctcttccctccgctcaaatgtacgagaaaagttatatgcaccgggacgttgttacgcat
gttgctgtgtcgtcggcggattttgttgtaactggaagtgttgatggacatttgaagttt
tggaagaaaaaggctattggcattgaatttgcaaagcattttaggtcccaccttggtcca
attgaaggcttagctgttagtgttgatggtttgctttgctgtacaatttcaaatgacaaa
tctgtgaagatatatgacgtagtcaactatgatatgatggtcatgattcgcacagagttt
gttcctggtgctgttgagtgggtctacaaacaaggggatgtcaaagccaggcttgccatc
agtgacagggactcatcatatgtacacattttcgatgcacgatctggtacaaatgaacct
attatctccagagaggtacatttgggcccagtgaaagttatgaggtataatcctgtattt
gatacagtgatttcagctgatcaacagggaatggttgagtattggactcctgacaccctt
aagtttccagagactggggtgaaattcagaatgaaaagtgatactaatctgtttgaaatc
ccgaaatgcaaaactactgtttcttctatcgaggttagcccagatggtaagcaattttca
attacttcgcccgatcgcaggatacgtgtattttggtttagcacaggcaaactacgacga
gtttatgatgaatctctcgaggtggcccaagatctccagagaagtgatgtgcctttgtac
cagctggaagccatcgactttgggcgaagaatggctgttgagagggaaattgagaaaaca
gaatctgccccacagccgaatgcagtttttgatgaaagctctaattttctcatctatgca
actctccttggaataaaagtggtaaatttacacactaataaagtttctcgaattctcgga
aaagtggagaataatgataggtttttgagaattgccttataccaaggtgacaaaagcagt
aaaaaagttagaaaaatccctgctgctgcagcaaatgttaatgaaagcaaagagcctttg
acagatcctactctcatatgttgtgctttcaaaaaacacagaatctatctattcagtcag
agagaaccagaggagcctgaagatgcaactaagggaagagatatattcaacgaaaagcca
cctgctgatgaactcttggctgcatcagagattggtaaatcatccacaacatctcttcct
gacaatgtgattttgcgtactacaatgggtgacatacacatgaaactgtatccagaggaa
tgtccaaaaactgtggagaacttcacaacacactgccgaaatggctattatgataacctc
atatttcatcgagtcatcaaaggtttcatgatacaaacgggagatcctttaggagatggt
actggtgggcaatccatttggggacgggagtttgaggatgaatttcataaaagtttacga
cacgacaggcctttcactgtgtcaatggcaaatgcgggagaaaacacaaatggatctcag
ttctttatcaccacagtggcaactccttggcttgacaacaagcacacagtttttggcaga
gttatcaaagggatggatgttgtgcaggctatagaaaaagtgaagacagacaggggagaa
aggccccaagtagacgtgaaaattctgaatgttactgtccccaagccttaa
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