KEGG   Malus sylvestris (European crab apple): 126616384
Entry
126616384         CDS       T09027                                 
Name
(RefSeq) ras-related protein RABA1b
  KO
K07904  Ras-related protein Rab-11A
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126616384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126616384
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126616384
   04031 GTP-binding proteins [BR:msyl04031]
    126616384
Membrane trafficking [BR:msyl04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    126616384
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   126616384
  Exosomal proteins of colorectal cancer cells
   126616384
GTP-binding proteins [BR:msyl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    126616384
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase GTP_EFTU AAA_22 PduV-EutP SRPRB ABC_tran Gtr1_RagA AAA_16 KAP_NTPase AAA_7 AAA_24 MCM NACHT TniB AAA_21
Other DBs
NCBI-GeneID: 126616384
NCBI-ProteinID: XP_050140395
LinkDB
Position
3:complement(31673510..31676243)
AA seq 217 aa
MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLTVDGK
VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV
VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEAKNVENSFAEVLTQIYHVVSK
KAVEGGENGTSSVPAQGEKINIKDDVSALKRVGCCSS
NT seq 654 nt   +upstreamnt  +downstreamnt
atggctggatacagagccgacgatgactacgactacctcttcaaggtggtcttgattggg
gactccggtgtgggcaagtccaatctgctctccaggttcactaagaacgagttcaacctg
gagtccaaatccaccattggagttgaattcgccaccaggaccttaaccgttgacggcaaa
gtcatcaaggctcagatttgggacactgctggccaagaaaggtatcgcgccatcactagt
gcgtactatcgcggggctgtgggtgcactccttgtgtacgatgtcactcgccatgcgaca
tttgagaatgttgacagatggctgaaagaattgaggaaccacaccgattccaacattgtt
gtgatgcttgttgggaacaaatcagatctgcgccaccttgtagctgtctcaactgaagat
gggaagtcctatgccgagaaggaatcactgtacttcatggaaacatctgcactggaagca
aagaatgtggaaaactccttcgctgaagttctgactcaaatataccatgttgtgagcaag
aaggcagttgaagggggagaaaacggaacttcatcagtcccagcacaaggagagaaaata
aatataaaggatgatgtgtctgctttgaagagagtcgggtgctgctcaagctag

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