Malus sylvestris (European crab apple): 126616388
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Entry
126616388 CDS
T09027
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126616388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126616388
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126616388
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
126616388
NCBI-ProteinID:
XP_050140398
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Position
3:complement(11200346..11205209)
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AA seq
700 aa
AA seq
DB search
MGYGNSKSIRFQDDVDLAKLPSVNGVGVVKLKYKIDGAPVAEPCRKEVPGKTGKSLKAKV
LSRVFSEDYERVQKKILDPRGQTIHRWNNIFLVTCLVSLFVDPLFFYLPSTRDEFCISIG
IPLEVVLTIVRSVADVFYIIQIFINFRKAYIAPSSRVFGRGELVIEPSKIALRYLRQDFW
IDLIAALPLPQVLIWIVIPTLRGSTVTNTKNFLRFIIIFQYIPRLFLIFPLSSQIVKATG
VVTEKAWAGAAYNLMLYMLASHVLGACWYLLSIERQESCWRSVCDLEKTLCKPDYFDCRW
AQNPGRKYWYKSSNVTNLCNPDNSYYKFGMYGDAVTYDVTTSSFFNRYFYCLWWGLRNLS
SLGQNLSTSTYIGEIMFAIIIATVGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQW
MRHRQLPPELRQSVRKYDQYKWLATRGVDEETLLKGLPMDLRRDIKRHLCLDLVRRVPLF
DQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC
RIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALVADDLKFVASQFRRLHS
KQLRHKFRFYSHQWRLWSACFIQAAWRRCKKRKEAAELKAKENHKETEPAKTPPVLGLVT
YAARLAASTRRGANKHSGSDSGVVSSLQKPAEPDFSVDEE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggttatggtaattcaaaatctataagatttcaagatgatgttgacttagcaaagcta
ccatcggtcaatggagttggtgtggttaagctcaagtacaagattgatggggcaccagta
gcagaaccctgcagaaaggaggttcctgggaagactggaaaatctttaaaagctaaagtt
ctgtccagagtcttttccgaggactatgagagagtgcagaagaaaatattagatcctcga
ggacaaactattcaccgttggaacaatattttcttagtaacttgtttagtttctctgttc
gtggaccctctattcttttacttgccatcgacgagagatgaattctgcattagtattgga
atcccacttgaagttgttctaacaattgttcgatcagtggctgatgtattttacataatt
caaatttttattaactttcgtaaagcttatattgcaccttcctctcgtgtatttgggaga
ggagagcttgtaatagaaccttcaaagatcgcattgaggtacctacgccaggatttctgg
atagacctcattgctgccctgccccttcctcaggtgctgatttggatcgtaatcccaacc
cttaggggttcaacagtgacaaacacaaaaaacttccttcggttcatcataatctttcaa
tacataccaaggctctttcttatatttccgctctcatcacaaatagttaaggctactggc
gttgtgacagaaaaagcatgggcaggggctgcatataatctgatgctatacatgttggca
agtcatgttttaggagcttgttggtaccttctttcaattgagcggcaagaatcttgttgg
agaagtgtttgtgatcttgagaagacattgtgtaaacctgattactttgattgccgttgg
gctcaaaaccctggcaggaagtactggtacaagtcgagtaatgtcacaaatctatgtaat
ccagataacagctattataagtttggtatgtatggcgatgcggtgacatatgatgttaca
acctcgtcgttcttcaacagatacttttactgtctctggtggggtctaagaaacctcagt
tctttgggacaaaatctttcaacaagtacttacattggagagataatgtttgcgataatc
attgcgactgttgggctggttctgttcgcattgctgattggtaatatgcaaacatacctc
caatccacaacagtcagactagaagagtggaggattaagagaactgatacagaacaatgg
atgcgtcataggcagctgcctccggaactaagacagtctgtacggaagtatgatcaatac
aagtggttggctactcgaggagttgatgaggaaactcttcttaaaggcctacctatggat
cttcgaagagacatcaagcggcacctttgccttgaccttgttcgtcgggttcctttgttt
gatcaaatggatgaaaggatgctagatgcaatatgtgaaaggctcaaaccggccttgtgt
actgagggcacatttctagtccgtgaaggagaccctgtcaatgaaatgctcttcataatc
cggggcaaccttgattcttacaccacgaatggtggtcgaactggattcttcaattcatgt
cgtattggtccaggtgacttctgtggtgaggaacttctgacatgggccttggaccctcgt
ccaagtgtaatcctgccatcttcaacgcgcacagtcaaatccatctctgaagtagaagca
tttgctctagtagcagatgacttgaaattcgtagcatcccagttcagaagacttcacagc
aagcaacttagacacaagttccggttctattcacaccaatggagattatggtctgcttgt
ttcatacaggcagcatggcgtcgatgtaagaaaagaaaggaagcagccgaactcaaggct
aaagaaaaccacaaagaaactgagcctgcaaaaacaccacctgtgttgggcttggttact
tacgcagcaaggcttgctgcaagtaccagacggggtgccaataagcattctgggtcagat
tctggagtcgttagctcattgcagaagccagcggaacctgatttttctgttgacgaggaa
tga
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