Malus sylvestris (European crab apple): 126616427
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Entry
126616427 CDS
T09027
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126616427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126616427
04147 Exosome [BR:
msyl04147
]
126616427
04090 CD molecules [BR:
msyl04090
]
126616427
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126616427
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126616427
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126616427
CD molecules [BR:
msyl04090
]
Proteins
126616427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_29
DUF87
RsgA_GTPase
AAA_30
DLIC
Motif
Other DBs
NCBI-GeneID:
126616427
NCBI-ProteinID:
XP_050140438
LinkDB
All DBs
Position
3:complement(27889540..27895450)
Genome browser
AA seq
1248 aa
AA seq
DB search
MGHKNSMFRYADGTDKLLMFFGTLGSIGDGLQNPLMMYVLSEVINSYGKGQVTNADVDKF
ALRLFYVAIGVGLAAFVEGLCWTRTAERQTSKMRMEYMKSVLRQEVSFFDTQTAGSSTTF
QVITIISSDATAVQVALCEKIPDCLTYMSTFFFCHIFAFMLSWRLTLAAMPLSILFIAPG
LVFGKILMGLVMKGIAAYGVAGGLAEQAISSVRTVYSYVGENQTLNRFSTALQTVTELGI
KVGLVKGVLMGSMGMIYVGWGFQAWVGTYLVTQKGEDGGHVFVAGFNVLMGGLSILSALP
NLTGITEALAATTRILEMIDRVPSIDTEDRKGKALSHVKGEIEFQDIYFSYPSRPDTPVL
QGLSLKIPAGKSVGLVGGSGSGKSTTIALLERFYDPIEGEILLDGHKTRRLQAKWLRSQI
GLVNQEPVLFATSLKENILFGKEGASMDEVITAAKAANAHDFIVKLPDGYETQAGQFGFQ
LSGGQKQRIAIARALLRDPKILLLDEATSALDAQSERVVQEAIDQASKGRTTIIIAHRLS
TIRTADLIFVLQAGKVVESGSHNQLMQKQGEQGGEYFKMVQMQQMAAKNEDYDEDFSSQI
YEKPRRRSVTPSPISFRSVTPSPAFNPTPMSMSMGTPYSFSVQYDPEDESDDEGFKRPNN
PPSQWRLLKMNAPESGQALLGCLGAIGSGAVQPINAYCVGSLISVYFLQDKSEIKRQSRV
LSLVFLGIGFFNFFTNLLQHYNFAVMGEKLTTRVREKVLEKLLTFEIGWFDQDENTSAAI
CARLATEANMVKSLVGDRMPLLVQAVFGACFAYTVGLVLTWRLALVMIAVQPLVIGSFYA
RSILMKSSGEKARKAQKQGSQLASEAVINHRTITAFSSQKKILGLFGATLKGPKKDSIKQ
SYVSGAGLFSSQFFNTAATALAYWYGGRLLVDGKITPKELFQAFLILLFTAYIIADAGSM
TSDISKGNSAIQSVFAMLDRKSEIDPDNQWGLEIKRRIKGRVEFRNVFFSYPTRPEQMIL
KGLSLRIDAGKTVALVGGSGSGKSTIIGLIERFYDPMNGTICIDEQDVKNYNLRLLRSHI
ALVSQEPTLFAGTVRENIAYGKQKAKESEIKRAASLANAHEFISGMDNGYDTYCGERGVQ
LSGGQKQRIAIARAILKNPSILLLDEATSALDSVSEKAVQEALEKMMASRTCIVIAHRLS
TIQKANSIAVIQNGKVAEQGSHNELLSLGRNGAYYNLIKLQTGSSAPS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggggcacaaaaacagcatgtttcgatacgcagatggcaccgataagttgttgatgttc
ttcgggacgttaggcagcatcggtgacgggttgcagaaccctctcatgatgtatgttctt
agtgaggttattaattcttatgggaagggtcaggtcacaaatgcagatgtagataagttt
gcactcaggttattctatgttgcaattggagttggattagcagcatttgttgaagggtta
tgttggacacgaacagcggagaggcagacttctaaaatgagaatggaatatatgaaatct
gttcttagacaagaagtttccttctttgacacccagactgctggttcttcaacaacattc
caagttatcacgatcatctcctccgatgccactgcggtccaagttgccttgtgtgagaag
atacctgactgcctgacgtacatgtcaactttcttcttctgccatatattcgcctttatg
ctgtcatggaggctgacgttggcggctatgccgctttcaatcttgttcatagctccggga
cttgtattcggaaagatcctgatggggctggtaatgaagggaattgcagcttatggagtt
gctgggggacttgctgaacaagcaatttcttcagtaagaaccgtgtactcatacgttgga
gagaaccaaacgctgaataggttcagcactgcacttcagacagttactgaacttggaata
aaggtaggtttggtaaagggagtgctgatgggaagcatgggaatgatctatgttggttgg
ggtttccaagcttgggtcgggacttatttggttactcagaaaggcgaagatggcggtcat
gtttttgtagccggtttcaatgtcctcatgggaggcttgagtattttaagtgcactccca
aacttaactggcatcaccgaggcattagcagctacaactcgaatccttgaaatgattgat
cgagttcctagtatcgacactgaagacagaaaagggaaggctttgtcacatgtcaaagga
gaaatagaattccaagacatttacttcagttacccatcgagacctgataccccagtctta
caaggcttgagtcttaagattccggctggtaagagtgtaggtctagttgggggcagtggt
tcgggcaagtcaaccaccattgcattgctcgaaagattttatgaccccattgaaggagaa
attctgttggatggacacaaaactcgtagacttcaggcgaaatggttgagatcccagatc
ggcctagttaatcaggaaccagttctgttcgcaacttccttaaaagagaacatacttttc
ggaaaggaaggggcctcaatggatgaagtaataactgcggccaaagctgcaaacgcacat
gacttcatcgtcaagttaccagacggatatgaaactcaagctggccaattcggattccaa
ctgtctggtgggcaaaagcagcggattgccatagcgagagctctgctgagggatccgaaa
attctgcttcttgatgaggcaactagcgcactggatgcgcaatcagaaagagtagtgcag
gaggcaattgatcaggcatcaaaagggaggacaacaatcatcattgcccatcgcctgtct
acaatccgaacagcagacttgatttttgttcttcaagccgggaaagtagtagaatcaggc
tcacacaatcaactaatgcaaaagcaaggggaacaaggaggcgaatacttcaagatggta
caaatgcagcagatggcagccaaaaatgaggattatgatgaggatttcagttctcaaata
tatgaaaagcctcgccgtaggagtgttacgccaagccccattagtttcagatcagttact
ccttctccagccttcaaccccacaccgatgtctatgtccatgggaacaccctactctttc
tctgtccaatatgatccagaagatgaaagtgacgatgaaggcttcaagcgcccgaacaat
cctccttcccaatggcgtctgctaaaaatgaatgcaccagaatctggacaagccttactt
ggatgcttgggtgcaataggatccggggcagtacaacctataaatgcctattgtgtagga
tcgcttatatcagtctacttccttcaggacaaatctgaaattaagagacaatccagagtc
ttgtccctcgttttcttaggcattggctttttcaacttcttcaccaatctcctccaacac
tacaattttgcagtcatgggagaaaagttgacgacaagggtaagagagaaagtgcttgaa
aagctgctgacttttgagatcgggtggtttgatcaagatgagaacacaagtgcagctatt
tgtgcaaggttagccaccgaagcaaacatggttaaatctcttgttggggaccggatgcca
ttgctggtccaagcagttttcggggcttgctttgcttacacagtaggacttgtgttgaca
tggaggctagcccttgtgatgatagcagtgcagccactagtcatcgggagtttttacgct
agaagcatcctaatgaagagcagtggtgagaaagcacgaaaagctcaaaagcaaggaagc
caattggcgagcgaagctgtcatcaaccacagaactataaccgctttttcttctcaaaaa
aagattttggggctgtttggtgctaccttgaaaggtccaaagaaggatagtattaaacag
tcttatgtttcaggtgctggtttgtttagctcccaattcttcaacactgccgctacagct
ttagcatactggtacggtgggaggctactggtggacgggaagataactccaaaggaactc
ttccaggcatttttgatactgctattcactgcttatatcattgcagatgccggaagcatg
acttctgatatatctaaaggaaacagtgccattcaatcagttttcgcaatgttggacagg
aaaagtgagattgatccggataaccaatggggacttgaaatcaagagaaggatcaagggt
cgcgtcgagttcagaaatgttttcttttcatatccaacaagacctgagcagatgatcctt
aagggattgagcctcagaatcgatgcaggcaagacagtggcgctggttgggggaagtggt
tctggaaaatccaccattatcggactcattgagaggttttacgacccaatgaacggaaca
atatgcatagatgagcaggatgtcaagaactataacttgagactgttgaggtcacacatt
gcattagtcagtcaggagcctactctatttgctggaacagtccgcgaaaatatagcctat
ggaaaacagaaagcgaaagaatctgagataaagagggctgcaagtcttgccaacgctcat
gaattcatcagtggaatggataatggttatgatacatattgtggagaaagaggagttcag
ttatcaggtggtcagaaacaaaggattgcaatagctcgggcgatactgaagaacccttca
atcctcctactagatgaagctaccagcgcgcttgacagcgtgtcggaaaaggcagttcaa
gaagcgcttgaaaagatgatggctagtagaacatgcatcgtcattgctcaccggctatct
acgatacagaaggccaactccattgccgtgatccagaacgggaaggtagcggaacaaggc
tcacataacgaattgctttcgttggggcgcaacggagcgtactacaatcttataaaacta
caaactggtagctcagctcctagttga
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integrated database retrieval system
