Malus sylvestris (European crab apple): 126616488
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Entry
126616488 CDS
T09027
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 5-like
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126616488
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126616488
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
126616488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
CTD11
SprB
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
126616488
NCBI-ProteinID:
XP_050140517
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All DBs
Position
3:35123738..35126070
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AA seq
319 aa
AA seq
DB search
MEDAQEVSDTMSDKASENTQETRDEMLSRHRKEISKLQDKETEMKKAAAKGSKAEQKAKK
KQVEEEITRLSANLKEKHAAELASLGYSASNGNEKSKLDTLVKAIAGVSVTSQPEQAKPS
KSSKRREKRAQQDAAREQRIQEEQSNRVSDRMIEDEKLEKKLEPFGLTINEIKPDGHCLY
RAIQDQLAHLSGGSSPYTYQQLREMVAAYMRKHASDFLPFFLSENPADGDSDESLAERFE
NYCKEVESTAAWGGQLELGALTHCLKKPIKIYSGSFPDVEMGKEYKSDSGTGSSDSSIML
SYHKHAYGLGEHYNSVVRI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgcacaagaagtatctgatacaatgtcagacaaagcttctgagaatacacag
gaaactcgtgacgaaatgctttctaggcacaggaaagagatatcaaaacttcaggacaag
gaaactgaaatgaaaaaggcagctgccaaagggagcaaggctgaacaaaaagctaagaaa
aagcaggtggaggaagagattactcggctttctgctaatcttaaagaaaaacatgctgca
gaacttgcttcgttaggctatagtgctagtaatgggaatgagaaaagtaaacttgacact
ttagtgaaggccatagctggtgtttctgtcaccagtcaacctgagcaggcaaagcccagc
aagagttcgaagaggcgagagaagagggctcagcaagatgcagccagggagcaaagaatt
caagaagagcagagcaaccgagtaagtgatcgaatgattgaggatgaaaaactagagaaa
aagctcgaaccctttggcttgaccattaatgaaataaagcctgatggccattgcctctac
cgagctatccaggatcaactggcccacctttccggaggttcatcaccttacacgtaccaa
cagcttcgagaaatggtcgctgcttatatgaggaagcatgcatctgattttctccctttt
ttcttgtcggagaatccagcagatggagattctgacgagtcacttgcagagaggttcgag
aactactgtaaagaagtggagtcaactgcagcatggggaggacagctagagcttggtgct
ttaactcactgccttaaaaagcctatcaagatatactcaggatccttccctgatgtggag
atggggaaggagtacaaatccgatagcggaacaggttcttccgattcgagtattatgttg
tcataccataagcatgcatatgggcttggtgagcactataattccgtggttcgaatatga
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