Malus sylvestris (European crab apple): 126617260
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Entry
126617260 CDS
T09027
Name
(RefSeq) novel plant SNARE 11-like isoform X1
KO
K08494
novel plant SNARE
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126617260
Membrane trafficking [BR:
msyl04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
126617260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
Syntaxin_2
VBS_C3G9
Occludin_ELL
LMBR1
Med11
Plexin_cytopl
ING
BDV_P24
ANIS5_cation-bd
DUF7605
DUF6988
DUF948
Otopetrin
PCRF
ZNF380_CC
FapA
SpoIIE_N
Bud13
Motif
Other DBs
NCBI-GeneID:
126617260
NCBI-ProteinID:
XP_050141241
LinkDB
All DBs
Position
3:complement(4496944..4502116)
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AA seq
170 aa
AA seq
DB search
MDPLSAISEELAEIDGQIADIFRALSNGFQKLEKIQDSNRQSRQLEELTDKMRDCKRLIK
EFDREVKNMERINDPNTSRMLNEKKQSMIKELNSYVALKKQYASNLENKKIDLFDGPAED
FGEQNVLLASGKQISTFLLTCNLALYTFALMGYNSLSTYYPSADILWFYI
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggatccgttatctgcaatcagcgaagagctggcggagatcgacggacaaatcgccgat
atcttccgtgcattgtcaaatgggtttcagaagctggagaagattcaggactcgaatagg
cagagtcggcagctggaagagctcactgacaagatgcgagactgtaagaggcttatcaaa
gaatttgatagagaagtcaagaatatggagagaataaatgacccaaataccagtagaatg
ctgaatgagaaaaagcagtcaatgatcaaagagttgaattcatatgtggctctgaaaaaa
caatatgcatcaaaccttgaaaacaagaaaattgatctctttgatgggccggcagaagac
tttggggaacaaaatgtcttgctagcctcgggtaagcaaatatctacgtttttgttaaca
tgcaatctggccttgtatacttttgcactaatgggctacaattcactatcaacatattac
ccatccgctgatattctatggttttacatatag
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