Malus sylvestris (European crab apple): 126617275
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Entry
126617275 CDS
T09027
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
msyl03015
mRNA surveillance pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126617275
09122 Translation
03013 Nucleocytoplasmic transport
126617275
03015 mRNA surveillance pathway
126617275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126617275
03041 Spliceosome [BR:
msyl03041
]
126617275
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126617275
Spliceosome [BR:
msyl03041
]
Complex C
Other components
EJC/TREX
126617275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
126617275
NCBI-ProteinID:
XP_050141257
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All DBs
Position
3:complement(22693065..22697280)
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AA seq
202 aa
AA seq
DB search
MASGDVETVDFEPEDDDLMDEDGAVDAEPSASPRAPLPKLKSAITGVGAASAAPKKTKGR
GFREDLNADRNSRLTASHFDSLNSSNGLEPQRSVEGWIILVTGVHEEAQEDHLQDAFGEY
GEIKNLHLNLDRRTGFVKGYALIEYESFKEAKTAIDKMNGEPLLTQVLTVDWAFSNGSFL
DGSRKNSRPLRERRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggagatgtagaaacggtggacttcgagcccgaagatgacgacctcatggac
gaggacggagccgtcgacgccgagccctccgcctcccccagggcaccactccccaagctc
aagtccgcaatcaccggcgtcggagcggcgtctgccgcccctaagaagaccaaaggtcgc
ggattccgtgaagatctgaatgccgaccgtaacagccgcctcactgcatcccacttcgac
tctctcaactcctccaacggcctcgaaccccaacgatccgttgagggatggattattctg
gtcactggggtccatgaagaggcccaagaggaccacctacaagatgcatttggtgaatat
ggggagataaaaaatttgcatttaaatcttgatcgccgcaccgggtttgtgaaggggtat
gcactgattgaatatgagagttttaaagaggcaaaaactgcgatagacaaaatgaacgga
gaaccgttacttacacaagttttaactgttgattgggccttcagcaatggatccttcctt
gatggatccaggaagaactcaagaccgcttagagaacgtcgctcaaggagtcctaggagg
agatattaa
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integrated database retrieval system
