Malus sylvestris (European crab apple): 126617304
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Entry
126617304 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126617304
KO
K13095
splicing factor 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126617304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126617304
Spliceosome [BR:
msyl03041
]
Complex A
Other components
Complex A specific factors
126617304
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Ras
Motif
Other DBs
NCBI-GeneID:
126617304
NCBI-ProteinID:
XP_050141286
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Position
3:774289..785241
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AA seq
704 aa
AA seq
DB search
MSGTTMTPASSAGTQKVSMFAAKAGFVIPKNKLSGSLVPVFRGSKNLGAGDAGSGESKKQ
IQRKTKWGPDLTQDASVKKGRSLAYQTRVDQITQQLKSGMLEDENDEIEDLLSAPQDLHH
KSSKHQIDTKDVDQLELEKREAIGEILKLNPSYKAPPDYIPLLKEATVPIPVKEYPKYNF
VGLIYGPGSDNQKQLEKETGAKIQVYGTKAGTGQKAEIKPSDGSEIHGEYENLYVHISAD
TFEKVDAAVAVIELLVTSVSGNLAAVSSTGASVSADNAHVPNQVQDTTTSNMVPTTVVNQ
GMVQPLPGLAQTPLDGQFQYRGPFLSRGPSSTPMYMPGFTPLNSSRPNLNNPSHLSTSPF
NPAYLPSSFGLPPSLVSPRQNPPTTQFLPHTYMAPQPASVQTNVSAPLTFMGNRPLPAGS
STGWSSGPPAPQPGVASMPPPSNIPTGNMVSSVNHPIAAPSSIFIPLPQAGLPSTSLQAR
VPSSVSGSVPNIAPLKPPMMTAQSPGDFTFQPHRPQNPSFQTVPQPSSHFSAHNASLARP
MLPSPAPQAPSFQFPQPGSQVLSRPQLGDHMGQHPSAHMSAAPYARNSTAISVPPRLATF
LESSTVLPRTPHPPMRPSNFNPPHQMPNLPGPLPPRPGNYIQIQQNYPAHATRPEIPRAP
NQQFNNLAFSSGKSASGPGGGQQLYDPFSPTSANQQQGGNPGKM
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtacaacgatgacacctgcatcatcagctggtacacaaaaggtctccatgttt
gctgccaaggctgggtttgttataccgaaaaacaagctgtcgggttcacttgtgcctgtc
tttcgcggaagtaaaaacctaggagccggtgatgcaggtagtggagaaagtaagaaacag
attcagaggaaaacaaaatggggtcctgatctcacccaagatgcttctgtcaaaaaggga
agatctttagcttatcagactcgggtggatcaaattacacaacagctgaaatctggaatg
ttagaggatgagaatgatgagattgaggacttactatcagcacctcaagatctgcaccac
aaatcctctaagcatcaaattgatacaaaggatgtcgaccagttggaacttgaaaagcgg
gaagccataggtgagatattaaagttaaatccaagctacaaggccccacctgattatata
cctttgttgaaagaggctacagtccctattcctgtgaaagaatatcctaaatacaatttt
gttggcctgatatatggtcctggaagtgataaccagaaacaattagaaaaggaaaccgga
gccaagattcaagtctatggtaccaaagcagggacaggacagaaggctgaaataaaacca
tctgatgggagtgaaatccatggtgaatatgaaaacttatatgttcatatatcagctgac
acatttgagaaagtagatgcagcggttgctgtgattgagctcttagtcacctctgtatca
ggcaatctggcagcggttagcagtacaggtgcttcagtttctgctgataatgctcatgtt
cctaatcaagtccaggacactaccacctctaatatggttccaactactgtggtaaatcag
ggaatggtacaaccactgccaggactggcacaaactccactggatgggcagtttcagtac
cgtggtccatttctctcgaggggcccatcttccactcccatgtatatgcctggcttcact
cctctgaattcttcgagaccaaacctcaacaatccttcccatctttcaacatcacctttc
aaccctgcgtacctgccttcatcatttgggcttccgccatctcttgtttcccctagacaa
aatccaccaacaacacaatttttgccgcatacatatatggctccccagcctgcatcagtg
caaactaatgtttcagctcctctcacattcatgggaaaccgaccactgcctgctgggagc
tctactggatggtcaagcggtccaccagctccacaaccaggtgttgcgtccatgccacca
ccttcaaatataccaacggggaatatggtatcttctgtaaaccatcctattgcagcacca
agttctatttttattccactgcctcaagcaggacttccttctacatctctgcaagcaaga
gttccaagttctgtttctggaagtgttccaaatattgctcccctaaaaccaccaatgatg
acggctcaaagccctggcgatttcacttttcagccgcatcgaccacagaatccatccttc
caaacagttccccaaccaagcagtcacttttcagcccataacgcttctcttgccagacca
atgttgccgtctccagcacctcaagcaccgtctttccagtttcctcagccaggcagtcag
gtgttatcgagaccacaactcggtgaccacatgggtcagcatccatcagctcatatgtct
gctgctccctatgccagaaattcaactgccatctcagttcctcccagactcgcaacattt
ctagaatccagtaccgttctacctcggacgccacacccaccaatgagaccgagtaacttc
aatccacctcaccagatgcccaatttgccaggtcctctgcctccaaggccaggaaattat
attcaaattcagcaaaactatcctgctcacgcaactcgacctgagatcccacgtgctcca
aatcaacagttcaacaaccttgcattttcctctggcaagtcggcgtctggtcctggagga
ggacagcaactttatgatccattctcacccacttccgcgaatcaacagcagggaggtaat
ccaggaaagatgtga
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