Malus sylvestris (European crab apple): 126617635
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Entry
126617635 CDS
T09027
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126617635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126617635
Ubiquitin system [BR:
msyl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
126617635
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
126617635
NCBI-ProteinID:
XP_050141638
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All DBs
Position
4:17680492..17682168
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AA seq
458 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGDF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctaaccgggaagaccatcaccttggaagtcgagagctcc
gataccatcgacaacgttaaggctaagatccaagataaggagggcatccctcccgatcag
cagcgtctcatcttcgccggaaagcagcttgaggacggccggaccctcgccgattataac
atccagaaggaatcgaccctccatctggtgcttcgtctcaggggaggtatgcagatcttc
gtcaaaaccctaaccgggaagacgatcaccctcgaagtcgagagttccgacacgatcgat
aatgttaaggccaagatccaggataaggagggtattccccctgaccagcagagacttatc
ttcgccggcaagcaattggaggacggccgcaccctagccgactataacatccagaaggag
tcgactctccacttggttctccgattgagaggaggtatgcagatttttgtcaaaacccta
acggggaagacaattactctggaggtcgagagctctgataccatcgataacgtgaaggcc
aagatccaggataaggagggtattcccccggatcagcagcggttgatcttcgctggcaag
caattggaagatggcaggactctggcggattacaatatccagaaggagtcgactctccac
ttggtgctgcgattgaggggtggtatgcaaattttcgtgaagaccctaacagggaagaca
attaccctggaggtcgagagttccgatacgattgataacgtgaaagcaaaaattcaagac
aaggagggtattcctccagatcagcagagattgatctttgccggtaagcaattggaagat
ggcaggactctggcggattacaatatccaaaaggagtcaactttgcatttggtccttcga
ttgaggggtggtatgcagatttttgtgaagactcttaccggaaagactatcactctggag
gttgaaagctcggatacgattgacaacgtgaaggcgaagattcaagacaaggagggtatt
cctcctgatcagcaaaggcttatctttgctgggaaacaattggaggacggtaggaccttg
gcggattacaacatccagaaggagtcgactcttcatcttgtgctcaggcttcgtggtggt
atgcagatatttgtgaagacactgacaggaaagacgatcactctggaggttgagagctct
gacactattgacaatgtgaaagctaagattcaggacaaggagggtataccaccggaccag
cagagattgatctttgctgggaaacagctcgaggatggtcgtaccctagccgattataat
attcagaaagagtctaccctccaccttgtccttcgtcttcgtggtggtgatttctga
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