Malus sylvestris (European crab apple): 126617681
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Entry
126617681 CDS
T09027
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126617681
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126617681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
126617681
NCBI-ProteinID:
XP_050141686
LinkDB
All DBs
Position
4:complement(13383771..13391565)
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AA seq
1424 aa
AA seq
DB search
MASNHPPFQVEDLTDEDFFDKLVEDDLRPSESGPEYGQGNDSDDGKAFANLSIGSSVAVS
EDSDHETKTTDENKRFVNPNVGDSAAVSEDSAAKPQTKEEKGAEESNSFVFDSVIESNNA
VDNDAVIESNNGAEAVRSQLRLDSTVSKGNESGASGVKEIGWGSFYADSADNGIHGFGSY
SDFFSELGDGSGDFPMKVDGSLSTESKTVLNNEDQTAHQEGLNHLVSNEKCQEGQVYGGS
EQDQNSTEYWESLYPGWKYDANMGQWYQVDSFDVPANAQGSVGTDDWTTVSDGNKTEVSY
FQQTAQSAAGTVTETSTTGSLSNWDQVSQMTNGYPKHMVFNPEYPGWYYDTIAQEWRSLE
AYSSSVQSTAQSQNGNSMYGQEYRQDDNYGPQAVVGNQGQDSKWVGSYSKYNQHASNMWQ
AQTAAKSEGFSGFSGNQKQSNSFGSTVNTDQYMSLNSFGAVPLYNKASQGHGSAKETVGF
QSFIPAGNFSQQFNQGNAKMSEQIQFSDDYYGAQKPLSYSQQPVNYSQPPFQSGNQFSYA
PSVGRSSAGRPPHALVTFGFGGKLILMKDNSSLRNPSYGTQDPVGGSVSVLNLMEVFTGK
TDPSSFGMSTCDYFRALCQQSFPGPLVGGSVGSKELNKWIDERIANCESPEMDYRKGKVL
RLLLSLLRIACQHYGKLRYPFGTDTVSRENDTPESAVAKLFASAKSNNVQFSYYGSVSHC
VQKTPSEGQLRATASEVQNLLVSGRKKEGLQCAQEGQLWGPALVIASQLGEQFYVDTVKQ
MALRQLVAGSPLRTLCLLIAGQPAEVFSADTTAEVNLPGAANTSQQPAQFGANKMLDDWE
ENLAVITANRTKDDELVIIHLGDCLWKDRSEITAAHICYLVAEANFESYSDSARLCLIGA
DHWKSPRTYANPEAIQRTELYEYSRVLGNSQFILLPFQPYKLIYAHMLAEVGRVSDSLKY
CQTILKSLKTGRAPEVETWKQLVLSLEERIKTHQQGGYSVNLVSTKFVGKLLNLFDSTAH
RVVGGLPPPAPSTSQGSAHGNGHYQQPMGPRVSSSQSTMAMSSLIPSASMEPISDWTSDG
NRKPMHNRSVSEPDFGRTPRQVDSSKQTASPDAQGKSSGGSRFSRFGFGSQLLQKTVGLV
LRPRPGKQAKLGETNKFYYDEKLKRWVEEGVEPLAEDTVLPPPPICTPFQNGVSDYNLRS
VLKKEGSPTKGSPDLQTSTPPGPTSGTPPIPPSSNQFSSRGRLGIRSRYVDTFNQGGGSP
VNSFESPAVPSVKPLVAANAKFFIPTVAPSNEQAMEAIAESVQEDGGATNENPSTFGNND
SFHTPPPSSSSSNTMQRYPSMGNIQSMGVATTSNDSAPPHSRRTASWGGSSNDVLSPPME
TGEIKPLGEALGMSPAMFRPSELSRTRTPMNGGSFGDDLHEVEL
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatcatcctccatttcaggtggaggatctgacggacgaggatttctttgat
aaattggttgaagatgatctgaggccctccgaatcaggccccgaatatggccagggaaat
gattccgatgacggtaaggcgttcgccaatctgagtattggtagctctgtagctgtatct
gaggattcggaccacgaaaccaaaactactgacgaaaataagcggttcgtaaatcctaat
gttggtgattctgcagctgtatctgaggattcggctgccaaaccccaaacgaaagaggaa
aagggtgcagaagaatctaattcattcgtgtttgatagtgtaattgagtcgaataatgcg
gttgataatgatgcagtgatcgagtcgaataatggggcggaggcagtgagatcccagttg
aggttggattcgacagtgagcaagggcaacgagtcgggagcttcaggggttaaggagata
gggtggggttctttttatgccgattctgcggataatgggatccatgggtttggatcgtac
tcagattttttcagtgaattgggggatggttcgggggattttcccatgaaagtagacgga
agtttgagtactgaatcgaaaactgtactcaataatgaagatcaaacagcccatcaagag
ggtttgaaccatttggttagtaacgagaaatgtcaagagggtcaagtttatgggggaagt
gagcaggatcaaaacagtacagagtattgggaaagtctctatccagggtggaagtatgac
gctaacatggggcaatggtatcaggtggacagtttcgatgtgcctgcaaatgctcaaggg
agcgttggcactgatgattggaccactgtttctgatggtaataagactgaggtttcttat
tttcagcagacagcacagtctgctgccggaactgtgactgaaaccagcacgactggcagt
ttgtcaaactgggatcaggtctcacagatgacaaatgggtacccgaaacatatggttttc
aatcccgaatacccaggttggtattatgacacaattgcccaagaatggcgctcattggaa
gcatatagctcctctgtacaatcgactgctcagtcccagaatggaaatagtatgtatggt
caagagtacaggcaagatgacaattatgggccacaagcggtcgtcgggaaccaaggtcaa
gacagcaagtgggttgggtcctacagtaagtacaatcagcacgcttcaaatatgtggcaa
gctcaaactgcagctaaaagtgaggggttttcaggttttagtggaaaccagaaacagagt
aattcgtttggttctacagttaacacggatcagtacatgtctttaaattcttttggagca
gttcctttgtacaacaaagcaagtcaaggtcatggttcagctaaagagactgttggtttc
cagagtttcatcccggctgggaactttagccagcagtttaatcaaggaaatgcaaagatg
agcgaacaaatacaattctcagatgattactatggcgctcagaaacctttaagttactca
cagcaacctgtaaattattcacaaccacctttccagagtggcaatcagttttcatatgct
cccagcgtaggaagatcatctgctgggcgccctccgcatgccctagtaacttttggattt
ggtggaaaactcattttaatgaaggacaatagtagcctcaggaatccgtcatatggaacc
caggatcctgtaggaggctcagtttctgtcctgaacttaatggaagttttcacgggaaag
actgatccttcgagttttggaatgagtacttgtgattattttcgtgctttgtgccaacaa
tcattcccaggtcccttggttggagggagtgttggaagcaaagagctgaataaatggatt
gatgagaggattgctaactgtgaatcgccagaaatggactataggaaaggcaaagtattg
aggttgcttctttctttgcttaggatagcttgtcaacattacggaaaacttcgatatcct
tttggtaccgacactgtatcaagggaaaatgatactccagaatcagcagttgctaaactt
tttgcatctgcaaagagcaataatgtgcaattcagttattatggctctgttagccactgt
gtgcagaaaacgccttcagaaggacaattgcgagcaactgcttctgaggtacaaaatctt
ctggtttctggtagaaagaaagagggtttacaatgtgcacaagaaggtcagttgtgggga
cctgcgcttgttattgcttcacagcttggagaacagttctatgttgatactgtgaagcaa
atggcacttcgccagctggttgcaggatcacctttgcggactttatgcctgctaattgca
gggcaacctgctgaagtattctctgctgacactacagctgaggtcaatcttccaggcgct
gctaatacatctcaacagcctgcacagtttggtgcaaataaaatgcttgatgactgggag
gagaatttggctgtgataactgcaaacagaacaaaagatgatgaactggttattatacat
cttggagattgcttatggaaggataggagtgagattactgcagcacacatctgctattta
gtggcagaagcaaattttgagtcatactcggatagtgcaaggctatgtctaattggagca
gatcactggaagtcgcctcgaacttatgctaatccagaggccattcagaggactgaactc
tatgaatattcaagggtgcttgggaactctcagttcatccttctaccatttcagccatat
aagctcatatatgcacacatgcttgctgaagttggaagagtttctgactcgttgaagtac
tgtcaaacaatacttaagtctttgaaaactggtagagcacctgaagtggaaacgtggaag
caactagtattatctcttgaggagaggattaaaacccatcagcaggggggatactctgta
aatttagtttctacaaagtttgtaggtaaattgctcaacttgtttgatagtactgcacat
cgtgttgttgggggcctaccaccacctgcaccgtccacgtcccaaggaagtgctcacggt
aatggccattaccaacagcccatgggccctagagtttctagtagtcaatcaacaatggcc
atgtcatcattaattccttctgcttcaatggaacccataagtgactggacatctgatggc
aaccgaaagccaatgcataatagaagtgtttcagagccagattttggcagaactccaaga
caggttgattcatcaaagcaaacggcctcaccggatgcccaaggaaaatcctcagggggt
tctcgcttttctcgttttggtttcgggtcacagctcttgcaaaagactgttggtttagta
ttaagaccccgcccaggaaaacaggctaagttgggtgaaacaaacaagttctactatgac
gaaaaacttaaaagatgggttgaggaaggtgttgaacctctagctgaagataccgtgttg
cctcctcccccgatatgtacaccctttcagaatggtgtctctgattacaacttgagatct
gttttgaagaaagaagggtctcccactaagggcagcccagatttacaaacttcaacccct
ccaggaccaacttcagggaccccacctattccacctagctcaaatcaattctcatcccgt
ggacggttgggtattcgatccagatatgtcgacacattcaaccaaggtggtggaagccca
gtaaactcgttcgagtcacctgctgttccatccgttaagccacttgttgctgccaacgca
aagttttttattcccaccgtagcaccatcaaatgaacaggcaatggaggctattgctgaa
agtgtacaagaagatggtggtgcaactaatgaaaatccttcaacattcggtaataatgat
tcattccatactcctccgccttcatcgtcatcatcaaataccatgcaaaggtacccaagc
atgggtaacattcaaagtatgggagttgccacaacttccaatgactctgctccaccccac
tcacgaaggacggcctcatggggtggaagctccaatgatgtattaagccctcctatggaa
acgggtgagataaaacctctaggggaggcgttaggcatgtccccggcaatgtttaggccg
agtgagctttcccggacacgcaccccaatgaatggaggcagttttggtgatgaccttcat
gaagtggaactttga
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