Malus sylvestris (European crab apple): 126617704
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Entry
126617704 CDS
T09027
Name
(RefSeq) acyl-CoA-binding domain-containing protein 4-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126617704
Membrane trafficking [BR:
msyl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
126617704
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
126617704
NCBI-ProteinID:
XP_050141704
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Position
4:27069466..27073506
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AA seq
648 aa
AA seq
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MGSLGGEAARKKAMWLYPKIMGFNPSERWGHSACYSHGVLYIFGGCCGGMHFSDVLVLDL
EKMVWNTLVSTGQGPGPRDSHSAVVLGHKMIVFGGTNGSKKVNDLHILNLVTKVWTRPEC
TGTPPSPRESHTATLVGDDKLVIFGGSGEGKGNYLNDLHVLDLNTMRWTSPEVKGDIPAP
RDSHSTIAMGKKLLVYGGDRGDRYYGGVDMLDMNTLTWSRLAVQGSSPGARAGHAAVSIG
TKVYVIGGVGDKHYYNDVWVLDVITCSWTQLETCGQQPQGRFSHTAVVTDSDIAVYGGCG
EDERPLNELLVLHLGAEHPKGRYNVSMCKTFGSHWNQERRRISKGADFNTQKTMLMGNHV
AVRETTHEPESEPKQSLRFKSDTLHPKRRRTTSTKSIDLESEQEEHSLSLSQHSSPSHSD
QEQIPNPKVVDSSPGSRGFQLFKKFNHSPSNSQSPNVTSNHKDIRNSAQRSADLNLLGEH
QTEPKREPYLHANFGRPSMQFQAVESKHFEAGPIQNMMGAEVQGKVDGAFDSGFLMTAMV
NGRLYRGVLFAPGPEIISRRPNFASTSQIPISEAKPFPNSNHLEPPLKLSELPMRNSMPG
SGLGLRQPQATRPFLPVRANPSVAKERSDLPGVFLTLGGPGSLPGGSY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggggtctttgggaggtgaagctgcaaggaagaaggcaatgtggctctatccaaagatc
atgggatttaatccttctgaaagatgggggcactctgcctgctattctcatggggttttg
tatatttttgggggatgttgcggcggcatgcatttcagcgatgttcttgtgcttgatctt
gagaaaatggtttggaacactcttgtgtcaactggtcaagggcctggtcctagagacagc
catagtgccgttgttctagggcacaagatgatagttttcgggggaacaaatggctccaag
aaggtaaatgatcttcatatactgaatcttgtgaccaaagtatggacacggccagaatgt
acaggtactccaccttcaccccgcgaaagtcacactgccacccttgttggtgacgataaa
ttagtgatattcgggggtagtggagaaggtaaaggaaattacttgaatgatcttcatgtc
ctagatctcaataccatgagatggacttctcctgaggtgaagggcgatattcctgctcct
cgagacagtcatagcacaattgcgatggggaagaagcttcttgtatatggcggggaccgt
ggtgataggtattatggtggcgtagatatgcttgacatgaacacactgacttggtcaagg
ttggctgttcaaggatcttcaccgggtgccagggcaggtcatgcagctgttagtatcggg
acaaaggtttatgtcattggaggggttggagacaaacattattacaacgatgtttgggtc
ctagatgtgattacttgttcgtggactcaacttgaaacatgcggccaacagccacaaggg
cgattctctcatactgctgttgttacagattctgacattgccgtctatggagggtgtggg
gaggatgagcgccctctgaatgagttgttggtgttgcatcttggagcagaacatcccaaa
ggtcgttacaatgtttctatgtgcaaaacttttggaagccattggaaccaagagaggcgg
aggatctcaaaaggagcagattttaacacgcagaaaactatgctaatggggaatcatgta
gcagtacgagagacaacacacgaaccagaatcagaacccaaacaatctctccggttcaaa
tcagatactttacatccaaagaggagaagaaccacaagtacaaaatcaatagacctcgaa
tcagagcaagaggagcattctctatcactctcccagcattcgtcaccatcacactcggat
caagaacagatcccgaatcctaaagttgttgattcctccccaggttctcgaggttttcaa
ctgtttaagaaattcaatcatagtccgagcaatagccaatctcccaatgtcacaagcaac
cataaagatattagaaattctgcacaaagatctgcagaccttaacttgttaggagagcat
caaactgaaccaaagcgagaaccatatcttcatgccaactttggtagaccaagtatgcaa
tttcaagcggtagaatcgaaacactttgaggcagggcctattcagaacatgatgggtgct
gaggttcaaggcaaagttgatggagcattcgactcaggtttcctaatgaccgcgatggtt
aatggaaggctttatagaggagtcttatttgcaccaggacccgagatcatctcaagacgg
ccaaatttcgcttcaacaagccaaattcccatttctgaggcaaaaccatttccaaactcg
aatcatttggagccacccttgaagctatccgagctgccaatgaggaattccatgccgggg
tccggcctaggcctcaggcaacctcaggcgactcgaccatttttgcccgttcgagccaat
ccatctgtagccaaggaaagaagtgatcttcctggtgtgtttttaacacttggaggacca
ggaagtttacctggtggatcttattag
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