Malus sylvestris (European crab apple): 126617710
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Entry
126617710 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126617710 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126617710
Membrane trafficking [BR:
msyl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126617710
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
126617710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Synaptobrevin
eIF2A
Beta-prop_IFT140_1st
Nuf2_DHR10-like
Lgl_C
CPSF_A
Motif
Other DBs
NCBI-GeneID:
126617710
NCBI-ProteinID:
XP_050141708
LinkDB
All DBs
Position
4:complement(23018849..23027517)
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AA seq
1118 aa
AA seq
DB search
MLAKRLLQKSINDSQHNLPHGGLTAEDLDLRVAVHYGIPSTASILAFDPIQRLLAIGTLD
GRIKVIGDDGIEGLFISPKQLPYKYIEFLQNQGYLVSILNDNDIQVWNLESRSLVYCLEW
ETNITAFSVIHGSNLMYVGDEYALVAVVKYDAEEGKLLRLPYHISANSLYEAAAFPFPID
QPIVGILPQLCSSGNRVLIAYQNGLVILWDVSEAKIVFIGGGKDLQLKDGVVKSTNEVNV
DSPEDTLEHQLGDKEISALCWASSNGSILAVGYIDGDILFWNMSSPASVKGQKSLSPSNN
VVKLQLSSAERRLPVIVLQWSTDYKSHNGCDGQLFIYGGDEIGSEEVLTVLTLEWSPGMG
NLRCVGRTDLTLTGSFADMILLPSSGTTGDNHKADVFVLTNPGQLHLYDDACLSALMSQK
ERSPSVSALEFPVVIPTTDPTMTVAKLNRVPTGENLLKALSEISSVVNLGSAQTPSAGTK
WPLTGGVPSQLSISENNGIERLYLTGYSDGSVRIWNATYPLFSFICLVESEVQGIKVAGS
SAPVSQMDFCAFTLNLAVGSECGLVRIYNLKGCSDGVKFIYVTETKCEVHDSPQAKGLQC
RAVFSLTNSPVQALQFVKHGAKLAVGFKCGHVAVLDTSSFSVLFFIKDASFSSSPVISMT
WKELTNSQWLLKSPKVSETKSTANLAEEVMFVLTKDANIHVIDGNAGNLIIPQPWHLKKE
SIALSMYVIDGRVSMSENVSDDNPPQEASKDSSTKNEPMPGDTPIVTNSHETEHDFSSES
TYSEERLLNSFILLCCVDSLRFYSTKSVIQGNNKPIRKVKHARPCIWTATFKRVEKVSGL
VLLFQTGEIEIRSIPDLELVKESSLMSILRWNCKANMDKTMSADDAHITLVNGYESAFIS
ILAVENDFRIPESLPCLHDKVVAAAADAALSVSLNQKKKQGTAPGILGGIVKGFKGGKMV
QSGDHTATPKSTFDHLEGMFWKSQLSEPSPPVDHQEVLELNIDDIEIDEPLSVASTLSPH
DVKDEKREGQSEREKLFQGGTGDTKPRVRTAEEIRAKYRKTEGASSAASEARNKLMERQE
KLEKISRRTEDLQNGAEDFSSMANELVKRLEGRKWWHI
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccaagcggcttttgcagaaatccataaacgattctcagcataatttgccacac
gggggtttgacggctgaagacttggacctgcgagttgcagttcactatggcatcccatcc
acggcgtccattcttgctttcgacccgattcagcgccttttggccattggaacactggat
gggaggattaaagtaatcggtgatgatggtattgaaggactgtttatatccccgaagcaa
ttgccttacaaatacattgagtttctacaaaaccagggttatttggtgagcatcttaaat
gataatgatattcaggtttggaatctcgagagcaggtccctagtttattgtctagagtgg
gaaacaaatataaccgcattttctgtaatccatggctccaatttaatgtatgttggtgat
gagtatgccctagtggctgtggtgaagtatgatgcagaggagggaaaacttttgcgattg
ccatatcatatttctgcaaattctttatatgaagctgctgcgtttccatttccaattgac
caacctatagttggaattcttccccaactctgttcatctggaaatagagtattgattgca
tatcaaaatgggttggttattctttgggatgtatctgaagctaaaatagtttttattgga
ggtggtaaggatctccagctaaaggatggagttgttaaatctacaaatgaagtcaatgtt
gattctccagaagatacattggaacatcaattgggagacaaagagataagtgctctttgt
tgggcatcttcgaatggctccattctggctgtgggatacatagatggagacattttattc
tggaacatgtcatctcctgcttccgtcaagggtcaaaaatctttatcgccatctaataat
gttgtgaagttacaattatcatctgctgaaaggagacttcctgtcatagttttacagtgg
tccacagattataaatcccataatggttgtgatggccaactatttatctatggtggcgat
gaaattggatcagaagaagttttgacggttctaactcttgaatggtcacctggaatgggg
aatttaagatgtgttggtcgtacggacctcacccttactggctcttttgcagacatgatt
ttgttaccaagttctgggacaactggggataatcataaagctgatgtttttgttttaacc
aaccctgggcaattgcatctttatgatgatgcttgcctctctgccttaatgtcccagaaa
gaaaggagtccatctgtctctgctttggagtttccggtggtgatacctacaactgatcca
accatgactgttgccaaacttaatagggtacccactggggagaacttattaaaagctcta
tcagagatatcctcagttgtgaaccttggctcagcacaaaccccatcagctggtacaaaa
tggcccttgaccgggggtgttcccagtcaactgtctatttctgagaataatggtattgag
agactgtacctaacaggatattcagatggatctgttcggatatggaatgcaacatatcca
ctcttctcttttatctgccttgtagaaagcgaggtgcaaggtataaaagttgctggttca
agtgctcccgtatcacaaatggatttctgcgccttcactttaaatctggctgttggcagt
gaatgtggtctggttcgaatttataatctgaaaggctgttcggatggggtaaaattcata
tatgtcacagaaaccaaatgtgaagttcacgattcgcctcaagcaaaaggattgcaatgc
agagctgtatttagtcttacaaattccccagttcaagcacttcagtttgtaaagcatggt
gctaaacttgctgtgggatttaagtgtggtcatgttgcggtgctggacacaagttccttt
tctgtattgttctttataaaagatgcatctttctccagctctccagtcatttcaatgact
tggaaagaacttacaaattctcaatggctcctgaagagcccaaaggtttccgaaacaaaa
tcaacagctaacctagcagaggaggtaatgtttgtcttaaccaaggatgcaaatatacat
gtaattgatggaaatgctggtaacctgatcatccctcagccatggcacttgaaaaaggag
tcaattgcactttcaatgtatgttatagatggcagagtatctatgtccgaaaatgtgtct
gatgataatccaccccaagaggcctccaaggattcttcaacaaagaatgagcctatgcca
ggcgatactccaattgttacaaattcacatgaaactgagcatgacttcagctcagaaagt
acatactctgaagagagattgttgaattcgttcattttgctttgttgtgtggattcactg
cggttttactcaacaaaatctgtgattcagggaaacaataaacccatccgaaaagtgaaa
catgcaagaccttgcatttggacagcaacttttaagagagttgaaaaggtttcgggattg
gttttgctgtttcagactggagaaattgagatcagatccattcctgatttagaattagtg
aaagaaagctccttgatgtcaattctaaggtggaattgtaaggcaaacatggataagaca
atgagtgccgatgatgcacatattacactggtaaatgggtatgaatcggcattcatctct
atattagctgttgagaatgatttcaggattccggagtctttgccgtgtctccatgataaa
gttgttgcagctgctgcagacgctgcactcagtgtctctttgaatcagaagaaaaaacag
ggtactgcacctggaatattaggtggtattgttaaaggctttaaaggggggaaaatggtc
cagagtggagatcatactgcaactcctaaatcaactttcgatcatttagagggcatgttt
tggaagtctcaactgtcagaaccatctccgcctgtagatcatcaagaagttttggagctt
aatatagatgacattgaaatagatgaacctctatcagtagcatctactttatcaccacat
gatgtcaaagatgaaaagagagaagggcaatcagaaagggaaaagttatttcaaggtggg
actggtgatacaaagcccagagttagaacggccgaagaaattagagctaaatatagaaag
actgagggtgcttcttctgcggcttctgaagcacgaaataagctcatggagaggcaggaa
aaacttgagaaaatcagccggcgtactgaagatctgcagaacggggctgaagacttctca
tcaatggcaaacgagcttgtcaagagattggaaggtcgaaaatggtggcatatttaa
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