Malus sylvestris (European crab apple): 126618515
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Entry
126618515 CDS
T09027
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126618515
03036 Chromosome and associated proteins [BR:
msyl03036
]
126618515
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
126618515
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126618515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CTD2
Trans_reg_C
Motif
Other DBs
NCBI-GeneID:
126618515
NCBI-ProteinID:
XP_050142565
LinkDB
All DBs
Position
4:29964160..29974663
Genome browser
AA seq
1480 aa
AA seq
DB search
MEESHEQMEENGEQVEESHEQVENIGSASSGSDSDSFIDDSEVDEVSISGEDEKLKPEEP
LSDKEIEELIAEFLEVESKAAEAQEALEKESLAKVESEVRKELAQTLHGDNLEAAVAEEM
DTLIEEWQAELDELETESAHLLEQLDGAGIELPSLYKCIESQAPNGCCTEAWKRRIHWIG
SQETGEFTKSRADAEQYLQTHRPVRRRHGKLLEDGASGFLQKKLAIDGSKDAVTADVDYW
GSFNKLFSDGATAGDASFGSKHWASVYLASTPQQAAEMGLKFPGVNEVEEIDDIDGNSGD
PFVAAAVANERELDLTEEQKKNYRKVKEEDDVNVDRKLQIRLKRRRHRKRSKQDAGRKDF
CLVDREIGSNMDLSSSMLDSSISISNGKIDEDLETANNIDQESITSNGSSPVTSSSEARG
SKRLSEDEELNIDNKRSRTVIIDSDDDTPLKDNSDCNAIKSEDQSYVEENICIAATGGLP
SQSLNDKLYCTACSKHAVEVCSHPLLKVIICADCRCLLEKKMQVKDPDCSECYCGWCGQS
KDLVNCKSCKTLVCATCIKRNIGEECLSDAQTSGWQCCFCCPSLLKTLTSQLEQAISSQD
LIISSSDSDSDSSDSEIDVAISSKRRRKKKIRRIIDDTELGEETRRKIAIEKERQERLMS
LQVQFSAKSKMKSFATCNGRLPEGASAEVLGDASAGYIVNVVREKGEEAVRIPPSISAKL
KAHQITGVRFIWENIIQSVRKVKAGDKGLGCILAHMMGLGKTFQVIAFLYTAMRSIDLGL
NTALIVTPVNVLHNWRQEFMKWRPSELKPLRIFMLEDVSRDRRAELLAKWRRKGGVFLIG
YSAFRNLSFGKNVKDRQIATEICHALQDGTDILVCDEAHVIKNTRADVTQALKQVKCQRR
IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEYGQHTNSTVDDVKIMNQR
SHILYEELKGFVQRMDMNVVKKDLPPKTVFVIAVKLSTVQRKLYKRFLVAHGFTKDKDYN
EKIGKRSFFAGYQALAQIWNHPGILQLRKDDKDYERRGDAVENFLADDSSSDENIDYNLG
FGEKNVNEILPGKKDDIFRKDWWNDLLHENDYKELDYSGKMVLLLDILATSSDVGDKALV
FSQSIPTLDLIELYLSRLPRHGNKGKFWKKGKDWYRLDGRTEGSERQKLVERFNDPLNKR
VKCVIISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHG
TMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENHVLDQDSVFLNDNV
TGKVEILPKHVVPLSQGSCFSDKLMESLLGKHSPRWIANFHEHETLLQENEEEKLTKEEQ
DMAWEVYRKSFGWEEVQRVPLNESAVDQKPAVSNTASSAPTKSILAESTAKNAFVQRKCT
NLSHLLTLRSQGTKQGCTTVCGECGRELSWEEHSRDSRLR
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagccatgagcaaatggaggaaaacggcgagcaagtggaggaaagccacgag
caagtggaaaatattgggagtgcttctagtggcagtgatagtgattcttttatagatgat
tcagaagttgatgaagtatcgatatccggagaagatgaaaaattgaagccagaggaacca
ttatctgataaagaaatagaggagctcattgctgaatttttggaggttgagagtaaggct
gccgaggctcaagaggcacttgagaaagagtctcttgccaaagtggagagtgaagttaga
aaggagttggcacaaactcttcatggggacaatttggaagcagctgttgcagaagaaatg
gatactttgatagaagagtggcaagctgagcttgatgaacttgagactgagagcgctcat
ttgttggaacaacttgatggggctggcattgagctaccgagcctttataagtgcattgaa
agtcaggctcctaatggttgctgcactgaagcttggaaaagacggatacactggataggg
tctcaagagactggagaatttaccaagtcaagggctgatgcggagcagtatctccaaacc
cacagacctgtgagaaggcgacacggtaaactattggaggatggcgctagtggatttctg
cagaaaaaactagccatagatggaagcaaggatgctgtgacagctgatgttgattactgg
ggttctttcaacaaattattttctgatggtgcaactgcgggtgatgcctcgtttggcagt
aagcactgggcttctgtttatttggccagtacgccacagcaagctgctgagatgggactt
aagttccctggggtcaatgaggtagaggagattgatgatattgatggcaattctggtgat
ccatttgttgcagccgctgttgcaaacgaaagagaactggatctcactgaagaacaaaag
aaaaattataggaaggtcaaagaagaagatgatgtaaatgttgatcggaagcttcaaatt
cgtttgaaacggaggagacatcgaaagagaagtaaacaggatgctggccggaaagatttt
tgcttagttgatcgggagataggaagcaacatggacctgtcttcgtctatgcttgactct
tctatcagtatctcaaatgggaaaattgatgaagatttggaaaccgctaataacattgac
caagaaagcataacgagtaatggttcttctccagtgactagttccagtgaagcaagaggc
tcaaagcgtctgagtgaggatgaggagctaaacattgataataagaggagtcgaactgtg
attatagatagcgatgatgacactccactgaaagataattcagactgcaatgcgataaaa
tctgaggaccagtcatatgtggaagagaatatctgcatagctgccaccggtggtctccct
tcacagagtctgaatgataagctctactgcactgcttgtagtaagcatgctgttgaagtg
tgctcacatccacttctgaaggtgattatttgtgcagattgcagatgcttattggaaaaa
aagatgcaggtaaaggatcctgattgctctgagtgttattgtgggtggtgtggacaaagc
aaggacctagtaaattgtaaatcttgcaagacattggtttgtgcgacttgtataaagagg
aatattggagaggaatgcttatctgatgcccagacctctggctggcaatgttgtttctgt
tgcccaagtcttctaaagacattgacatcgcaattagagcaagcaataagttctcaggat
ttgataatatctagctctgatagtgattcagatagttcagattcagagatagatgttgcc
ataagttctaagaggaggagaaagaagaaaattcgaaggatcattgatgatactgaatta
ggagaagaaaccagaaggaaaattgcaattgaaaaggaacgtcaagaacgcttgatgtct
ttgcaagtacaattttctgccaaatctaagatgaagagctttgcaacttgtaacgggaga
ttacctgaaggtgccagcgctgaagtgctgggcgatgcatcagctggttatatagtgaat
gttgtgagggaaaaaggtgaagaagcagttagaattcctccaagcatctcagcgaaattg
aaggctcatcagatcacgggtgtgagatttatatgggagaatatcatacagtcagtcaga
aaagtgaaggctggggataagggtcttggttgcattctagctcacatgatgggccttggt
aaaactttccaggtcatagcttttctgtacactgcaatgagaagtattgatttgggatta
aatactgcacttattgtcacccctgtgaatgtgctgcacaattggcgtcaagagttcatg
aagtggaggccttcagaactgaagccccttcgcatcttcatgctagaagatgtgtcaagg
gatagaagagcagaattgcttgcaaagtggagaaggaagggtggtgtttttttaattggc
tactcggcttttagaaacttatcctttggaaagaatgtgaaggataggcagatagctaca
gaaatttgtcatgccttgcaggatggaacagatatacttgtttgtgatgaggcccatgtt
attaagaataccagggctgatgtaacccaagccttaaaacaagtgaaatgccagagaagg
atagcattaactggatcaccacttcagaacaatctcatggaatattactgtatggttgat
tttgtaagggaaggttttcttggaagcagccatgagtttcggaatcgattccaaaatccc
atagagtatggtcaacatactaattcaactgtggatgatgtgaaaatcatgaaccaacgg
tctcatattctttatgaagagttgaaaggatttgttcagagaatggacatgaatgtggta
aagaaggacttaccaccaaaaactgtgtttgtaatagctgtgaaactttcaaccgtacag
aggaaattatacaagagatttcttgttgcccacggattcaccaaggacaaggattataat
gaaaagatagggaagagaagtttttttgccggttaccaagccttagctcagatatggaac
catccagggatcttgcaactaagaaaagatgacaaagactatgagagacgtggagatgct
gttgagaattttcttgcagatgacagctctagtgacgaaaacattgattataatttgggt
tttggagagaaaaatgtgaatgagattttgccaggaaaaaaagatgacatttttcgaaag
gattggtggaatgatcttcttcatgaaaatgactataaagagcttgattacagtggcaaa
atggtactcctgcttgacattctagctacgagttctgatgtgggggataaggcattggta
tttagccagagcataccaacccttgacctcatcgaactttatctttcaaggctacctcga
catgggaacaaagggaagttttggaagaaaggaaaagattggtacaggctagatgggaga
acagagggctcagaaaggcaaaagctggttgaacgctttaatgatcccctgaataagagg
gtgaaatgtgttataatttctactagagctggatcgttagggataaatctctatgctgct
aatcgtgtaataatagttgatggttcttggaatccaacatacgatcttcaggctatatat
cgtgcttggaggtatggccaaacaaagccagtgtttgcttacagattgatggcacatgga
actatggaagaaaaaatttataagcgtcaggtaacgaaggagggcctggctgcaagggtt
gttgatcgacaacaggtacataggacaatatctaaggaagagatgttgcatctttttgaa
tttggtgatgatgagaatcatgtgcttgaccaagatagtgtattcttgaacgacaatgtg
actggtaaagtggaaattttgccgaaacacgtagtgcctctttctcaaggaagttgcttt
tctgacaagctcatggaaagtttacttggcaagcattctccaaggtggatcgcaaatttc
catgaacatgagacccttttacaagagaacgaagaagaaaagctcacaaaggaggagcaa
gacatggcttgggaagtataccggaaatcatttggatgggaggaagtgcagagagttcct
ctcaatgaatctgcagtcgaccaaaaaccagctgtatcaaatactgcctcatctgcacca
acgaagagcatccttgctgaatccacggcgaagaatgcttttgtacagcggaagtgcact
aatctttcgcatttgctgacgctaagaagtcagggcacgaaacagggttgcaccaccgtg
tgtggggaatgtggccgcgagctgagctgggaggagcacagtcgagatagcaggctcagg
taa
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