Malus sylvestris (European crab apple): 126618562
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Entry
126618562 CDS
T09027
Name
(RefSeq) serine/threonine-protein kinase ATG1c-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126618562
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
msyl01001
]
126618562
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126618562
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126618562
Enzymes [BR:
msyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
126618562
Protein kinases [BR:
msyl01001
]
Serine/threonine kinases: Other
ULK family [OT]
126618562
Membrane trafficking [BR:
msyl04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
126618562
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126618562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
ABC1
Pkinase_fungal
APH
YrbL-PhoP_reg
Kdo
Motif
Other DBs
NCBI-GeneID:
126618562
NCBI-ProteinID:
XP_050142626
LinkDB
All DBs
Position
4:21329079..21335257
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AA seq
717 aa
AA seq
DB search
MAQASERGRVVGDYLVGRQIGSGSFSVVWHARHRVHGTEVAIKEIATGRLNKKLQESLMS
EIFILKKINHPNIIRLHDIIEVPGKINLVLEYCRGGDLSMYIQRHGKVPEALAEHFMQQL
VAGLQMLRDNNLIHRDLKPQNLLLSTNDNNSVLKIADFGFARYLQPQGLAETLCGSPLYM
APEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNSQIQLLQNIMKATELQFPSDSNNL
SSECKDLCQKLLRRNRLERLTFEEFFNHPFLSQQSSYSRSKRESRMAEGFPTSECNAMRN
MEESSQEDCLPFHLDDDSSGPEGSPSCSRRRSSMKSTYGFSLDTKGDRQEASPTTLYRYG
SATRKENSSLRLDGHRSSDRNPTDPLRSVHKKPVNARSRVVDSLELIDQDYVLVSGPPVD
VSSSSASASKPSPSFYKSQSLPRSFTTSSSAPMPIMGAAANSNMHCIGSLDSQSSAPGTS
LGSADMGDALEQPSTHCMTRLSSLQQCVSAITELVHEKTEARKHPEAFSIQLVILAIWKQ
ALHICHTQAASAMEGSPSQETARFRTTSKKQSSPDMDESLDVNTQGPEDISSEIEREFLR
EVEHAEELAKAIEPGHAEMPDAMETIFQSALVFGRHGGVDELMGDMESAAVFYTKAVRLL
VFLLVEAPSLILNPPFSLTNSDRYRLQTYIGILNNRQGYSRSQRMAILKCEEQQCPP
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcgtccgagagggggagggtcgtcggggattatctggtgggtcggcaaatt
gggtcgggttcgttctcggtggtttggcacgcgcgccaccgcgtccacgggacggaggtg
gcgattaaggagatcgcgacggggcggctgaacaagaagttgcaggagagtttaatgtcg
gagattttcatactgaagaagattaaccacccgaatattattcggttgcacgatattata
gaggttcctgggaagataaatcttgttttagagtattgcagaggtggtgatctttctatg
tatatacaacgccatggaaaagtgcccgaagctcttgcagagcacttcatgcagcagcta
gtcgctggtctgcaaatgcttcgtgacaacaatcttatacatcgggatctcaagccacag
aatctcttgctgtccaccaatgacaacaattctgtcttgaagattgcagattttggattt
gcaagatatctgcaacctcaaggccttgctgaaaccttgtgtggttcaccactttacatg
gctccagagataatgcaacttcaaaagtatgatgcaaaggcagatctctggagtgttggt
gcaattttatttcaactcgtaactgggagaaccccatttacaggaaacagtcaaatacag
ttgcttcagaacataatgaaagcaactgagttgcagttcccttcagatagcaacaatttg
agttcagagtgcaaggacttgtgtcagaaattgttacgccgcaatcgattggaacgccta
acatttgaagagttttttaaccacccatttctatctcagcagtcatcatattcgaggagt
aagagggaatcacgaatggcggagggatttcctacatctgaatgcaatgcaatgaggaac
atggaggaaagttctcaagaagattgtctacctttccatttagatgatgattccagtggc
cctgaggggagcccatcctgttcaaggaggaggtcctcgatgaagtccacttacggattt
tctctcgatacaaaaggtgatagacaggaagcatcacctaccactttgtacagatatggc
agtgcaacacgtaaagaaaattctagtcttaggttggacggccatagatcgtcagataga
aatccaactgaccctctaagatctgtgcacaaaaaaccagtgaatgctcgatcaagagtt
gtggattcactggagttgatcgatcaagattatgttcttgtgtctggacctccagttgat
gtgtcttcttcctcggctagtgcttccaaaccaagcccttcattctacaaatctcagagt
ctccctcgatcctttaccacctcatcaagtgcccctatgccaatcatgggtgcagcagct
aatagtaacatgcattgcataggaagcttagatagtcagagttctgctccagggacatca
ctaggatcagcggacatgggagatgctttggagcagccatcaacacactgcatgacaagg
cttagttcattgcagcaatgtgtgtctgctattactgaattagttcatgaaaagactgag
gcaaggaagcatccagaagcattctcaattcagcttgtaattcttgcaatctggaagcaa
gctcttcatatatgccatacacaggctgcctcagctatggaaggaagtccgagtcaagag
actgcaagatttaggaccaccagcaagaagcaaagtagtcctgatatggacgaaagcctt
gatgttaacactcaaggacctgaagatatttcttctgagattgagcgggaatttctccga
gaggttgagcatgcagaagaacttgcaaaggctattgaacctggacatgcagagatgcca
gatgcaatggagacaatatttcaatctgctcttgtttttgggagacatgggggtgtcgat
gaactcatgggtgacatggaaagtgctgcagtgttttatacaaaagctgtgcgtctcctg
gtctttcttctagtggaagcaccatccctcattctcaacccgcccttttccctgacaaac
tctgaccggtataggcttcaaacttacattggtatacttaataataggcaaggttactcg
aggtcacagcggatggcgattttgaaatgtgaggagcaacagtgccctccttga
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