Malus sylvestris (European crab apple): 126618642
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Entry
126618642 CDS
T09027
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126618642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126618642
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126618642
03012 Translation factors [BR:
msyl03012
]
126618642
04131 Membrane trafficking [BR:
msyl04131
]
126618642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126618642
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
126618642
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
126618642
Translation factors [BR:
msyl03012
]
Eukaryotic type
Elongation factors
126618642
Membrane trafficking [BR:
msyl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
126618642
Exosome [BR:
msyl04147
]
Exosomal proteins
Proteins found in most exosomes
126618642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
Motif
Other DBs
NCBI-GeneID:
126618642
NCBI-ProteinID:
XP_050142719
LinkDB
All DBs
Position
4:complement(1017712..1020852)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
GEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagtttcacatcaacatcgtggtcattggccatgtcgactccggcaag
tcgaccaccactggtcatcttatctacaagcttggcggtattgacaagcgtgtgattgag
aggttcgagaaggaagctgctgagatgaacaaaaggtcgttcaagtatgcctgggtgctt
gacaagcttaaggctgagcgtgagcgtggtatcaccattgatatcgccttgtggaaattt
gagaccacaaagtactactgcacggtcattgatgctccagggcatcgtgatttcattaag
aacatgattactggaacttcacaggctgactgtgctgtcctcatcattgactccaccact
ggtggttttgaagctggtatttccaaggatggacagacccgtgagcacgcacttcttgct
ttcaccctcggtgtgaagcagatgatttgctgctgtaacaagatggatgccaccactcct
aagtactccaaggcaaggtacgaagaaatcgtgaaggaagtttcatcctacctgaagaag
gttgggtacaaccccgacaaaatcgcctttgttcccatctctgggtttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggaccaacccttcttgaggctctt
gacctgatcaacgagcccaagaggccctcagacaagcccctccgtcttccacttcaggat
gtgtacaagatcggtggtattggaactgtgccagtgggacgtgtagagactggtatcgtc
aagcctggtatggttgtgacttttgggccaactggtctgaccactgaagttaagtctgtt
gagatgcaccatgaggctcttcaggaggcactccccggtgacaatgtcgggttcaatgtt
aagaatgtagctgtgaaggatctcaagcgtggtttcgttgcatccaactccaaggatgac
cctgccaaggaggctgccaacttcacatcccaggttatcatcatgaaccaccctggtcag
atcggtaacggatatgccccagttctggattgccacacttcacacattgctgtgaagttc
ggtgagatccttaccaagattgacaggaggtctggaaaggagattgagaaggagccaaag
ttcttgaagaacggagatgcaggtatggtgaagatgcttcccaccaagcccatggttgtg
gagaccttctctgagtacccaccattgggtcgctttgctgttcgtgacatgcgccagact
gttgctgttggtgttatcaagagcgttgagaagaaggatcccagcggtgccaaggtcacc
aagtctgctgccaagaagaagtga
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