Malus sylvestris (European crab apple): 126618701 Help Entry 126618701         CDS       T09027                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism msyl  Malus sylvestris (European crab apple) Pathway msyl03440   Homologous recombination msyl03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:msyl00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     126618701    03450 Non-homologous end-joining     126618701  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:msyl03032]     126618701    03400 DNA repair and recombination proteins [BR:msyl03400]     126618701 DNA replication proteins [BR:msyl03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     126618701 DNA repair and recombination proteins [BR:msyl03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      126618701     BRCA1-C complex      126618701    NHEJ (non-homologous end-joining)     MRX complex      126618701 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 AAA_15 AAA_21 SbcC_Walker_B SMC_N AAA_29 Rad50_zn_hook ABC_tran AAA_16 AAA_13 AAA_22 Motif Other DBs NCBI-GeneID:  126618701 NCBI-ProteinID:  XP_050142799 LinkDB All DBs Position 4:1608337..1621378 Genome browser AA seq 1315 aa AA seqDB search MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCSGELPPNAR SGHSFVHDPKVAGETETKAQIKLRFRTAAGKDVVCIRSFQLTQKASKMEFKAIDSVLQTI NPHTGEKICLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLQLENLQTKKDIAYKLREQISQAQEKTKILKS EMQGLEGMIQDVNTKIQYTDTKLKDLKKLEDQISQKSAVRSTLVNEREEKHKALEEENED TDEELKEWKTKFEEKIALLETKIRKLEREENDAESKITFLEKTLKESIWEISKLENEAEV HLCSKNERDSVIQKLFSRHNLGALPNPPFSNEVALNLTNRIKSRLLDLEKDLQDKKRSNE KELETTWDCYNDAKDHWKSIEAQKEAKEEIRNGLLKRIEEKKNERDSLELEVSNVDLSHI DEKEKNMHIEFERKTNQYAEREFESTIRQKDNEMFSIEQMITVAKKEKAAMAVDMEDRTK LSMKKNDLENRKRQHRKIINENRERVRGVLKGRFPPEKDLRGEISQVLSAVTMEFDDLST KSREAENEVNMLQTRIQEINNNIYKHRKDMDSKRRYIESKLQALDQQSFTVDYYPTVLDS AKEKRDVEKRKYNFADGMRQMFDPFERVARANHICPCCERPFSLQEEDEFVKKQRMNAAS SAEKLKVLAAESSTADSFFQQLDRLRMVYEEYVNIGKERIPNAERELDDLTQEMEQKSQA LDDVLAVSAQVKAEKDSIQALMEPIENADRLFQDIQREQKLVDELAHKLEQGHGSRSMQD IESELDNLLETKDNLHREVMKLRSEQMDLQDDLSTVKTRWHNVREEKIKAANLLSDVKRA EEELERLTEEKNRVDLDEKLLAESLRPLSKEKDKLLGYHNDLKVKLNREYDEQAERKREY EQEVEALNMINSKIKEYNDSKKGEKLQEIQEKQHLLESQLQSCKTRKKEILAELNKSKDL RANQDQVRRNIEDNLSYRKTKAEVEELTCELESLEDKMLKIGRKPKVQAELEKLSHEREE FLKRLNQNDGIISAHQSEISKHKIDLKNPDYKDIDKRYFDQLIQLKTTEMANKDLDRYYN ALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYICIHSDSDGAGTRSYSYKVLMQTG DTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNADSLAAALHR IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD NT seq 3948 nt NT seq  +upstreamnt  +downstreamnt atgagtacggtggacaagatgctaataaagggaatccggagcttcgacccggagaacaag cacgtcatcaccttcttcaagcccttaaccctaatcgtcggccccaacggcgctggcaaa accaccatcatcgagtgcttgaagctctcctgctccggcgagttgcctcccaacgctcgc tcaggccacagcttcgtccacgaccctaaggtcgccggtgaaactgagaccaaagcccag attaagctccgcttcaggaccgccgccggcaaagatgtggtgtgcattaggtcgtttcag ctcacgcagaaggcctcgaaaatggagttcaaggccatcgacagcgtccttcagaccatt aatccccacactggagagaaaatttgccttagttatcgatgtgccgatatggatagggaa atccctgctttaatgggtgtatcaaaggctatcttggaaaatgttatatttgtgcaccaa gatgaagccaattggcctttgcaggatccttcaacattgaagaagaagtttgatgatatc ttctctgctacccgatatactaaggcattggaggtaattaaaaaacttcacaaggatcaa gctcaagagataaagacctacaagctacagttggagaatcttcaaaccaaaaaagatatt gcatataagcttcgcgagcaaatttctcaagctcaagaaaaaacaaaaattttgaaaagc gagatgcaggggttggagggaatgatccaagatgtgaatactaaaattcagtatactgac acaaaactaaaggatttgaagaagctggaggaccagatatcacagaaaagtgctgtgaga agcaccctggttaacgagcgggaggagaagcacaaagctcttgaagaggagaacgaagac actgacgaagaattgaaggaatggaaaaccaagtttgaagaaaagattgcgcttttggaa actaaaatcaggaagctggagagggaagagaatgacgcagagagcaaaattactttcctt gaaaaaacgctaaaggaatctatatgggagattagcaagctcgaaaacgaagctgaagtt catttgtgctcaaagaatgagagagattctgtcattcaaaaactcttttcaaggcacaat ttgggtgctcttccaaatcctcccttcagcaatgaagttgcactgaacctcaccaatcga ataaaatcaagattgttggatctagaaaaggatttgcaagataagaagaggtcaaatgaa aaagaacttgagacaacatgggactgctacaatgatgcaaaagaccattggaagtctatt gaggctcagaaagaagctaaagaagaaataaggaatggccttctgaagcgcatagaggaa aaaaagaatgagcgtgattctttagaacttgaagtttcaaatgttgatctctctcacatt gatgaaaaagaaaagaatatgcatattgagtttgagagaaagacgaaccagtatgctgaa agggaatttgaatcaacaatacgccaaaaggataatgagatgtttagcattgagcaaatg attacagttgctaagaaagagaaagctgccatggctgttgatatggaggacagaacaaaa ctgtctatgaagaagaatgatttggagaatcgtaaaaggcaacatagaaagattattaat gaaaacagggagagagttagaggagtgctaaaagggaggtttcctccagagaaggatttg agaggcgaaatcagtcaagtcttgagtgctgttaccatggagtttgatgacttgagcacc aaatctcgtgaagcggagaatgaggtgaatatgttgcagacaagaatacaagaaattaac aataacatctacaagcatcggaaagatatggactcaaagaggagatatattgagtctaaa cttcaggccttagatcagcaatcttttactgttgattactatcctacagtcttggattca gccaaggagaaaagagatgttgagaaaaggaaatacaattttgctgatggtatgcgacaa atgtttgatccatttgaaagagttgcccgtgccaatcatatttgcccttgctgtgaacga cctttttctctacaagaggaagacgaatttgttaaaaagcaaagaatgaatgctgcaagt tctgctgagaaattaaaagtgctggctgcagagtcctcgactgctgactctttttttcag caattggacaggcttcgcatggtttatgaagaatatgttaacattgggaaggagagaatc cccaatgcagagagagaactggatgaccttactcaagagatggaacaaaagtctcaggcc cttgatgatgtgttagctgtttcggctcaagtaaaggctgaaaaggactcgattcaggcc ctgatggaacccattgaaaatgctgacagactatttcaagatatacaaagagaacagaag ctagttgatgagctggcacataaacttgaacaaggacatggttcgagatctatgcaagat attgagtcggagctggataatctgcttgagacaaaggataatttgcatagagaagtaatg aagttgagaagcgaacaaatggacctgcaagatgatttgagcacggtcaaaactcggtgg cacaacgtaagggaagagaaaatcaaagcagctaatttattgtccgatgtcaaaagggca gaagaagagttggagcgtttgaccgaagaaaagaatcgagttgatcttgatgaaaagctt ttggcagagtctcttcgccctttatcgaaggagaaagataaattacttggctaccataat gacttaaaagttaaacttaatcgcgaatatgatgagcaagctgaacgaaaaagagaatac gagcaggaagttgaggcattaaatatgattaattcgaaaattaaagagtataatgattca aagaaaggtgagaagttgcaggaaatccaagaaaagcaacatctgcttgaatctcaactt caaagttgtaaaactagaaagaaggaaatcttagctgagttgaacaaaagcaaagattta agagcgaatcaagatcaggtaagacgaaatattgaggataatttgagttacaggaaaacg aaagctgaagtagaggaacttacctgtgagcttgagtcactggaagacaaaatgctgaag attggtcggaagcccaaagttcaagctgaacttgaaaaactctctcatgagagggaggag tttctgaaaaggttaaaccagaatgatgggatcatttctgctcaccagagcgaaatttca aagcataaaattgatctcaaaaacccagattacaaggacattgacaagcggtactttgat cagctaatccagctaaagacaactgagatggcaaacaaggacctggacagatactacaat gcgcttgacaaagcattaatgcgcttccacagcatgaagatggaggaaataaataaaatt ataagagagttgtggcagcaaacatacagaggacaagatatagactacatctgtatacac tcagattctgatggtgctgggactcgttcttacagttacaaggttctcatgcagactggt gatacagagctcgaaatgagaggaaggtgtagtgctggtcagaaggtccttgcctccctc atcataagattggctttggcagaaactttctgcctcaactgcggaatactagccctagat gaaccaactacaaacttggatggcccgaacgctgatagtcttgccgctgctctccataga attatggaggaccggaagggccaggagaactttcagctgatagtaattacccatgatgag cgtttcgctcaactaattggccagcgccagcatgcagaaaaatattatcgggtggcaaag gatgatcaccagcatagcataatcgaagcccaggagatctttgattga

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