Malus sylvestris (European crab apple): 126619128
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Entry
126619128 CDS
T09027
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126619128
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126619128
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126619128
Enzymes [BR:
msyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
126619128
Amino acid related enzymes [BR:
msyl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
126619128
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
126619128
Prokaryotic type
126619128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
126619128
NCBI-ProteinID:
XP_050143362
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Position
1:26948477..26955965
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AA seq
1121 aa
AA seq
DB search
MWSLSCKCPTVKTFGTKVQQYMIGPHFRVLGKQTQVLYHFISNQIKFAAAAPPLLRRFHV
QRPLQSSPPAGRAAMDNGKGIEDPEKKKKKEEKAREKELKKQKALEKAAKLQAQQASSSS
KKSEKKHVKRSNEGEENPEDFIDPETPFGEKKRMSSQMAKQYSPSAVEKSWYGWWEKTGF
FVADAKSSKPPFVIVLPPPNVTGALHIGHALTAAVEDTIIRWRRMSGYNTLWVPGMDHAG
IATQVVVEKKLMRERQLTRHDIGREKFVAEVWNWKNKYGGTILQQLRRLGASLDWSRECF
TMDEKRSRAVTEAFVRLHKQELIYRDNRLVNWDCVLRTAISDIEVDYIDVKERTLLKVPG
YENPVEFGVLTSFAYPLEEGLGEIVVATTRVETMLGDTAIAVHPDDERYRHLHGKHAIHP
FNGRRIRIICDAILVDPEFGTGAVKITPAHDPNDFDVGKRHNLEFINVFTDDGKINQDGG
EFVGMPRFKAREAVTEALKKKGLFRDAKANEMRLGICSRSQDVVEPMIKPQWYVTCSGMG
KEALHAAIDDENRKLEIIPKQYTADWKRWLENIRDWCISRQLWWGHRVPAWYVVYEGDSP
DNFGVSDERWVVARNEEEAKGHASQKFEGKFQLMQDPDVLDTWFSAGLFPLSVLGWPDDT
EDLRAFYPTSVLETGHDILFFWVARMVMLGSTLGGNVPFTKVYLHPMIRDAHGRKMSKSL
GNVIDPLEVINGITLEGLHQRLLEGNLDPKELTVAKEGQVKDFPKGIEECGADALRFALV
SYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSRLGDDFVPPSYVNPDVLPFSCQWIL
SVLNKVISKAVLSLEAYDFSDAATAVYAWWQYQLCDVFIEAIKPYFSGNDPKYESERGFA
QATLWLCLDNGLRLLHPFMPFVTEELWQRLPSPKDHKRPASIMICEYPSTLERWTNERAE
IEMNLIDSVVKSLRSLSKESRERRPASVLCRTPLDREIICSHQLEIETLANLSSLTVINE
NDAAPTGCVVGVVNENLCVYLKLQGSRSLEADLEKIRKKMEDITLQQEKLSKAMNVAGYK
EKVPEKIQKANADKLESLEKEKMSLEEASQHMEAQISSNEK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcttgagctgcaagtgtccgacggttaaaacttttggcaccaaagtccaacaa
tatatgattgggccccactttagggttttaggaaagcagacgcaagtactctaccacttc
atcagcaaccagatcaaatttgcagcagcggcgccgcctctcctccgccgcttccacgtt
cagaggcctcttcagtcttcccctccggccggtagggcggcgatggataacggaaaaggg
attgaagacccagagaagaaaaagaagaaggaagaaaaggcaagagagaaggaattgaaa
aagcagaaagctttagagaaagctgccaagcttcaggcacaacaagcatctagttcctct
aagaagagtgaaaagaagcatgtaaagcgttccaacgagggggaggagaatccggaggac
tttattgacccagagactccatttggcgagaagaaacggatgtcgagtcaaatggcaaaa
cagtatagtccaagtgcagtagagaaatcgtggtatggatggtgggagaagacgggattc
tttgtggcagatgctaagagctccaaacctccttttgtcattgttttaccgccccccaat
gtgactggtgcccttcatattggccatgctcttactgctgctgttgaggacactataatc
cgttggcgaagaatgtctggttacaataccttgtgggtgcctggaatggaccatgctggg
atagcaacacaggttgttgtagaaaagaagctaatgcgtgaaagacagttaaccaggcat
gatattggtcgtgagaaatttgtagctgaagtttggaattggaaaaataagtatgggggc
accattttacagcagctacgtcgtttgggtgcttctttggactggtcccgtgagtgcttt
acaatggatgagaaaagatcaagggccgtgacagaggcttttgtaaggcttcataagcaa
gagcttatctacagggataatcgcctagtgaattgggattgtgtcttgcggacagcaata
tctgacatagaggtggactatattgatgtaaaagaaaggacgttgctaaaggttcctgga
tatgagaaccctgttgaatttggagtgttgacttcatttgcttaccctctggaagaaggt
ttaggtgagattgttgtggccactactagagtggaaactatgcttggtgatactgctatt
gctgtacatcctgatgatgaaaggtaccggcatcttcatggaaagcatgccattcatcct
tttaatggaagaaggattcgcataatatgtgatgcaattctcgttgatccagaatttggg
actggtgctgtgaagattacaccggcccatgatcctaatgactttgatgttggaaagcgc
cataatcttgaatttatcaacgtctttactgatgatggaaaaataaatcaggatggtgga
gaatttgtagggatgccacgtttcaaagcccgagaggcagtgactgaagcattaaagaag
aagggcctctttagagatgctaaggccaatgagatgcgccttggaatttgctctagaagt
caagatgttgtggagcccatgataaagccccaatggtatgttacatgcagtggtatggga
aaagaagcccttcatgctgccatagatgatgagaacaggaagcttgagatcatcccgaaa
cagtatactgcagattggaagagatggcttgagaacattcgtgattggtgcatttcaagg
caactctggtggggtcaccgtgttcctgcatggtatgttgtttatgagggtgatagtcca
gacaattttggagtatcagatgagcgatgggttgttgcgagaaatgaagaagaggccaaa
ggacatgccagtcaaaaatttgaggggaaatttcaattgatgcaggatcctgatgtgctt
gacacttggttttccgctggtctcttcccattgtctgtgttaggctggcctgatgataca
gaagatctgagggcgttttatcctacttcagttcttgaaaccggtcatgacattctcttt
ttctgggttgctcgtatggtaatgcttggaagtacattgggtggcaacgtaccttttaca
aaggtctatttgcacccaatgattcgcgatgcacatgggcgtaaaatgtctaagtccttg
gggaatgtcattgatcctcttgaagtaataaatggtattacccttgaaggtctgcatcag
aggcttttggagggaaatttggatcccaaggaattgactgtagccaaagaagggcaagta
aaggactttcctaagggtattgaagaatgtggtgctgatgctcttcgttttgctcttgtc
tcttacactgctcagtcagataagataaatctggacatccaaagggttgtgggttatcgt
caatggtgcaataaactgtggaatgcagtacgatttgctatgagcaggcttggggatgat
tttgtgccaccctcatatgtaaatccagatgtgcttccatttagttgccagtggatactc
tcggtactaaataaagtcatatccaaagctgttttgtcattggaagcgtatgacttctca
gatgcagccactgcagtgtatgcttggtggcagtaccaattgtgtgatgtctttattgaa
gctatcaagccttacttttctggcaacgatccaaagtatgagtctgaaaggggttttgca
caagccacactatggttatgtcttgacaatggtctgcggttgcttcatccgtttatgcca
ttcgtcacagaagaactgtggcagcgccttccgtcaccaaaggatcacaagaggccagcc
tcaattatgatatgcgaatatccttccactctagagcgctggacaaatgaaagggcagag
atcgagatgaatcttatagattctgttgtgaaatctctccgttcactttcaaaagaaagt
cgtgaaaggcgaccagcttctgtgctttgtcgaacaccattagatagggaaataatatgc
agccatcaactggagattgaaactctcgccaatttgtcatctttgacggtaatcaacgag
aacgatgctgctccaactggatgtgtggtgggtgttgtaaacgaaaacctttgtgtgtat
ctcaagcttcaaggaagccgttcattagaagccgaccttgaaaagatcaggaagaagatg
gaagacattacattgcaacaagagaagctatcgaaggcgatgaatgtagccggctacaaa
gaaaaggtcccggagaagattcagaaagccaacgcagacaagcttgaatcactcgagaag
gaaaaaatgtctctcgaagaagcaagccagcatatggaagcacagatatcgagcaacgaa
aagtag
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