Malus sylvestris (European crab apple): 126619219
Help
Entry
126619219 CDS
T09027
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126619219
03015 mRNA surveillance pathway
126619219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126619219
03036 Chromosome and associated proteins [BR:
msyl03036
]
126619219
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126619219
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
126619219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
126619219
NCBI-ProteinID:
XP_050143476
LinkDB
All DBs
Position
4:9294640..9297157
Genome browser
AA seq
168 aa
AA seq
DB search
MEKRNRDEKMGGPGPQTRGPPGRQLPPPPPPPHSRGPPPPPPRPRSEPIDREKTCPLLLR
VFTKIGAHHSEVDFAVRGNEPKDEVQIYTWKDATLRELTDLVKEIAPEARRRNARLSFAF
VYPDKRGRFVVKQVGMTNSHGNGRQVDESKALNDLSFQIGDYLDVAIL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagaaacagagacgaaaagatgggcgggcccggtccccagacgcgaggccca
cccggaagacaacttccgccacctcctcctccgcctcactccaggggtccgccgcccccg
ccgcctcgcccccgctccgaacccatcgaccgtgaaaagacttgccctctgctgcttcgg
gttttcactaagattggagctcatcacagtgaggtggactttgcagtgagaggcaatgaa
cccaaagatgaggttcaaatttatacatggaaagatgcaacacttcgtgagctaactgat
ctcgtcaaagagattgctccagaggctaggagaagaaatgctagactgtcttttgctttt
gtataccctgacaagcgcggtcgttttgtggtgaaacaggttgggatgacaaattctcat
ggaaacgggagacaagtggatgaaagcaaggcactgaatgatcttagctttcagattgga
gattatttggacgtggcgattctatag
DBGET
integrated database retrieval system
