Malus sylvestris (European crab apple): 126619462
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Entry
126619462 CDS
T09027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126619462
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126619462
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Helicases
126619462
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
UTP25_NTPase-like
T4SS-DNA_transf
AAA_19
Motif
Other DBs
NCBI-GeneID:
126619462
NCBI-ProteinID:
XP_050143814
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All DBs
Position
4:18020987..18025306
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AA seq
536 aa
AA seq
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MEEGTSFLFSGVNFNRKKFATDFSRFQKNKESEKVVEDSSLLEIPKSEAEVEAEKEEPVV
PVKKRKRKGEVSEGVEGISVFKTSKSAKAAKAGKEKPGNEITEQKKKLNRQLERDSLTRK
KYNIHVSGNNIPSPLDNFADLSSRYGCEPYLLQNLAELGFKEPTPIQRQAIPVLLSGREC
FACAPTGSGKTLAFVSPMLMKLKHTSKDGIRAVILCPTRELAAQTTRECKKMAKGNKFYI
KLMTKELARNADFSKIRCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELGLLK
QIDSVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASDTIKQKLVFA
GSEEGKLLALRQSFKESLNPPVLIFLQSKERAKELYGELLFENVRVGAIHSDLSQTQREN
AVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRRGEAI
TFYTEADIPYLRNIANVMSTSGCEVPSWIMALRKQKWKKHRPGRESISTQPKDEKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggcacttcatttttgttctccggcgtcaacttcaaccggaaaaagtttgcc
acggacttctccagattccagaagaacaaagagagcgagaaagtggtagaagattcgagc
ttgttggaaattccaaaatctgaggcggaggtggaggcagagaaggaggagccagtagtg
ccggttaagaagaggaagcggaagggggaggtttccgagggtgtggaggggattagtgtc
tttaagacctcaaaatcggcgaaggcagcgaaagcggggaaagagaagcctggcaatgaa
atcacggagcagaagaagaagttgaatcggcaactcgagcgggattcgctgacgcgaaag
aagtataacattcatgtgtccgggaataacatcccttcaccacttgataattttgcagac
ttatcctcaagatatggatgcgagccatatttacttcagaatttggcagaacttggattt
aaagaaccaacgccaatccaaaggcaggctattccagtcctcttatctggtcgagaatgc
tttgcttgtgctccaactggatctggaaaaactcttgcttttgtttctcccatgctaatg
aaacttaagcatacatctaaggatggtatccgagctgttattctttgtccaacacgtgag
ttagctgctcagacaaccagagagtgcaaaaagatggcaaagggaaataaattctacatc
aagttaatgaccaaagagcttgcaagaaatgccgatttttcaaaaatacgctgtgatata
ctcatttctactccacttcggttacggttggctatccggaaaaagaaggttgatttaagc
agggttgagtatctggtattggatgagtctgataagctttttgagcttggcttgttaaag
cagattgattctgtggtcaaagcatgttcgaacccttcaattattcgctccttatttagt
gctactttacctgatttcgttgaggagcttgcccgcaccataatgcatgatgctgttcga
gttatcattggcaggaaaaatactgcttctgacactatcaagcaaaaactggtctttgct
ggaagtgaagaagggaagctattagcacttcgtcaaagctttaaggagagtctgaatcca
ccagtgctgatatttttacaaagcaaggagcgagctaaggaactctacggagaactgttg
tttgagaatgtaagagttggtgccatacattctgatctgtcacaaacacagcgagaaaat
gctgtagatgacttcagagctggaaaaacatgggttttaattgccactgatgttattgct
cggggtatggatttcaaaggtgtcaactgtgtaattaattatgattttccagattctgcg
gctgcgtacattcacaggattggtcggtgtggacgagcagggaggaggggagaagctatt
actttctacacagaggcagatattccatatctacggaatatagctaatgtgatgtcaaca
tcaggttgtgaagttccgtcttggatcatggccttgcgcaaacagaagtggaaaaaacac
cgacccggaagagaatcgatatcaacccaaccgaaagatgagaaggagtaa
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