KEGG   Malus sylvestris (European crab apple): 126619508
Entry
126619508         CDS       T09027                                 
Name
(RefSeq) uncharacterized protein LOC126619508
  KO
K15361  WD repeat-containing protein 48
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    126619508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126619508
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     126619508
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 RAWUL WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_WDR75_2nd ANAPC4_WD40 Mcl1_mid
Other DBs
NCBI-GeneID: 126619508
NCBI-ProteinID: XP_050143859
LinkDB
Position
4:complement(28762204..28770453)
AA seq 761 aa
MHRVGSSGNTNNSSRPRKEKRLTYVLSDADDTKHCAGINSLSVLKASVSGCDYLFTGSRD
GTLKRWALAEDAATCSATFESHVDWVNDAVLAGDNTLVSCSSDTTLKTWNCLSSGTCTKT
LRQHSDYVTCLASAEKNSNIVASGGLGGEVFVWDLEAALTPVAKSGESMEDDSSTVVNGS
GNAITSLRTISSSNSISMHTTQPHGYVPISAKGHKESVYALSMNDSGSLLVSGGTEKVVR
VWDPRTGSKKMKLRGHTDNIRALLIDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTD
SVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLSTGEHPILQLALHDDSIWVATTDS
SVHRWPAEGSNPQKIIQRGGAFLAGNLSFSRARVSLEGSTLVPVNKEPIFTIPGTPGIVQ
HEILNNRRHVLTKDTADSVKLWEITRGVVIEDYGKVKFEEKKEELFEMVSIPAWFTVDTR
LGSLSVHLDTPQCFSAEMYSADLNIVGKPEDDKVNLARETLKGLLAHWLAKRKQRFGSQA
SANGDVSSGKDITTRSITHSRIEVDSNAENDSMVYPPFEFSTTSPPSVITEGSQGGPWRK
KITDLDGTEDEKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSTVQILTQGKLSAPRI
LRIHKVVNYVVEKMVLDKPVDSANPDATFAPGLAGGPLQLSSVGDGSFRSGLKPWQKLKP
SIEILCNNQVLSPDMSLATVRAYIWKKSEDLVLNYRVIQGR
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgcaccgagtgggtagttcagggaacacaaacaattccagtcgccctcgtaaagagaag
agattaacatatgtgttgagtgatgctgacgacacgaagcattgtgccggcataaattct
ttgtctgtactgaaggcatcagtgtctgggtgtgattacctgtttactggaagccgtgat
ggcacactaaaaagatgggcgctggctgaagatgctgctacatgttcagcaacctttgag
tctcatgtggattgggttaatgatgctgttcttgcaggtgataatacgcttgtttcttgt
tcttcagataccacccttaagacgtggaattgtttgtcaagtggaacttgtaccaaaact
cttcgtcagcattctgactatgtcacatgccttgcttccgcggagaaaaatagcaatatt
gttgcctctggtggacttggaggggaggtatttgtatgggatcttgaagcagctcttact
ccggttgcaaagtcaggtgaatcaatggaagatgatagttcaactgttgtcaatggttct
ggaaatgcaattacaagtttacgtactatcagctctagcaacagcatttctatgcacaca
actcagccacatggatatgtcccaatctctgccaaaggtcataaggaatcagtttatgca
ttgtcaatgaatgatagtggatcgcttctggtctctggtggaacagagaaggttgttcgt
gtttgggatccaagaacaggttcgaagaaaatgaaactaagagggcatacagataatatc
agggctctgctgattgattctactggaagattttgcttgtcaggatcttctgattcaatg
atcaggctatgggatcttggtcagcagcgatgtgtgcattcttatgctgtgcatacagat
tctgtttgggcacttgccagtaccccaacatttagtcatgtatatagtggtgggagagac
ctttctttatacttgacagacttggccaccagagagagtctcttgctttccacaggggaa
catcccattttgcagttggctttacatgatgatagtatatgggttgcaacaacagattct
tcagttcatagatggcctgctgaagggagtaatccccagaagattattcaaagaggtggt
gcattcttggctggaaatttatccttttcaagagcaagggtgtccttagaaggatcaacc
ctagtccctgttaataaagaacctatatttacgattcctggaactcctggaatagtgcaa
catgaaatattaaacaatagaaggcatgtcttgacaaaggacactgctgattcagtgaag
ttgtgggagatcacgaggggtgttgtcattgaggattatggaaaggtcaaatttgaggag
aaaaaagaagagctttttgagatggtgagcattcctgcatggttcactgtagataccaga
cttggaagtttatctgtacatttagataccccacaatgcttttcggcagagatgtattca
gcagaccttaacattgtggggaagcctgaagatgacaaggttaatctagcgcgagaaacc
cttaaagggctcttggctcattggttggcaaaaagaaagcaaaggtttggatcacaagca
tcagctaatggggatgtgtcatctggaaaggatattactactagaagtattacccattca
agaattgaggtggatagtaatgctgaaaatgattcaatggtctatcctcccttcgaattt
tctacaacttcccctccttctgttattactgagggctctcagggaggcccatggaggaag
aaaatcactgacctagatggcactgaagatgagaaggactttccttggtggtgtctcgat
tgtgtgttgaataatcgcctaccccctagagaaaataccaagtgcagtttttatctacat
ccatgtgaaggttcaactgttcagatcctcactcaagggaaactaagtgcccctcgtatt
ttacgaattcataaagttgttaattatgttgttgagaagatggtccttgacaaaccagtg
gatagtgccaatcccgatgctacatttgctcctggtcttgctggaggaccattgcagcta
tcatcggttggagatggatctttccgatctggattgaagccatggcaaaagcttaagcct
tctatagagatattgtgcaacaatcaggtcttgtccccagacatgagcttagccacggtg
cgggcttatatatggaagaaatctgaggacctggttctcaattacagggtgattcagggc
aggtga

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