Malus sylvestris (European crab apple): 126619510
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Entry
126619510 CDS
T09027
Name
(RefSeq) protein HASTY 1-like isoform X1
KO
K14289
exportin-5
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126619510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126619510
03036 Chromosome and associated proteins [BR:
msyl03036
]
126619510
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
126619510
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
126619510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
126619510
NCBI-ProteinID:
XP_050143860
LinkDB
All DBs
Position
4:complement(28711913..28719880)
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AA seq
1204 aa
AA seq
DB search
MEESSNSNTAASRVAQAIAVALDWSSTPDARKAAVAFLESIKTGDVRILANAAFLLVKKD
WSSEIRLHAFKMLQHLVRLRWEELSPTERRNFANITVDLMSDIASPSEEWALKSQTAALT
AEMVRREGLNLWQELFPTLVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLL
RGLTQSLPEILPLLYTLLERHFGAALSEAGKQQFDLAKQHAATVTATLNAVNAYSEWAPL
PDLAKSGIIHGCGFLLSSPDFRLHACEFFKLVSQRKRPIDDTSAPEFDSAISNIFQILMN
VSKEFLYISSSGTGVIDESNIEFVEYICESMVSLGSTNLQCIAGDSIVLPLYVQQMLGFF
QHFKLALHFQSLNFWLALMRDLMSKPKAVAHSAGDGSDPVDFEKRKVLSFLNDEICSAIL
DVSFQHMLKREKVIHGTTFSLGQLELWSDDVEDKGTFGQYRSKLLELIKLVALYKPLIAG
SKVSERIDTIIKSLLLSPMPAQDLAVMESMQLALENVVSTIFDGSNEIAGGHSEVQLGLC
RIFEGLLQQLLSLKWTEPALVEVLGHYLDAMGSFLKYFPDAVGSVINKLFELLNSLPFVV
KQDPSTSSARYARLQICTSFIRIAKTADTSVLPHMKGIADTMAYMKREGSLLRGEHNLLG
EAFLVMASAAGIQQQQEVLAWLLEPLSQQWTQIEWQNNYLSEPLGLVRLCSETPVMWSVF
HTITFFEKALKRSGTRKAQSNLQHNSTESSMPLHPMASHLSWMLPPLPKLFRVLHSLWSP
SVFQILPGEIKAAMTMSDVEKFSLLGEGNPKLLKGTIAFANGSHISTSKEGYVESNESDI
RNWLKGIRDSGYNVLGLATTIGDSFYKCLDSQSVALALVENIHSMEFRHIRLLVHSVLIP
LVKFCPVDLWEAWLEKLLLPLFQHCQQALSCSWSGLLHEGRAKVPDAHAILAGSDLKVEV
MEEKLLRDLTREICSLLSVIASPQLNTGLPSLEHSGHVHRVDVSSLKELDAFASSSMVGF
LLKHKGIALPALQICLEAFTWTDGEAMTKVSSFCSSLIGLAVSTNSVELLQFVSKDLFSA
IIQGLALESNAFISADLIGHCRDIYIHLCDRDPTPRQILLSLPCIKQHDLLAFEEALTKT
SSPKEQKQHMKSLLVLATGNKLKALAVQKSVNVITNVSTRPRSTANTKETRVDDGETVGL
AAIL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcagcaacagcaacacagcggctagcagggtcgcccaagccattgccgta
gctctcgactggagctccactcccgacgcccgcaaagcagccgttgctttcctcgaatcg
attaagaccggagatgtgcggattttggcaaacgctgcgtttcttctagtgaagaaggat
tggtcttccgaaattcggttgcatgcatttaagatgttacagcatttggtccgattgcgg
tgggaagaactaagccctacagagcgtagaaactttgcaaatatcacagtcgatttaatg
tctgatattgcaagtcctagtgaggagtgggctttaaaaagtcagacagcagcccttact
gctgagatggttagaagagaaggactaaatctatggcaagaattgtttccaactttggtt
tcattatcctccaagggtcctattcaagctgagttggtctccatgatgctaaggtggctt
cctgaagatattactgttcacaatgaagacttggaaggagatcggagaaggcttttgctg
cgtgggctgacccaatctttacctgaaattttgcctttattatacactttactagagagg
cactttggagctgcattgagtgaagcaggaaaacaacaatttgaccttgcaaaacaacat
gctgcgacagtaacagctactttgaatgctgttaatgcatattctgaatgggctccattg
cctgatcttgctaaatctggtataattcatgggtgtggtttcttactttcttcacctgac
tttcgtcttcatgcttgtgagtttttcaaacttgtttcccaaaggaagagacctattgat
gatacctctgctcccgaatttgattctgcaatcagtaatatctttcaaatattaatgaat
gtctccaaagaatttttgtacatatctagctccggtactggggtaattgatgaaagcaat
attgagtttgtggaatatatatgtgaaagtatggtgtctttgggttccacaaacttgcaa
tgtattgctggcgatagcattgtgctaccactttatgtacaacagatgctggggtttttc
caacattttaagctagctcttcattttcaatctctcaacttttggctggcgctaatgaga
gacttgatgtcaaagccaaaggctgttgctcactcagctggagatggttctgatccggtc
gattttgaaaagagaaaagtcttaagttttttgaatgatgaaatatgtagtgcaattctg
gatgtatctttccaacacatgctcaagagagaaaaagtaattcacggaacaacattttct
ttggggcagttggaattatggagtgatgatgttgaggacaaggggacttttggccagtat
cgttcaaagttgttagaactgatcaagttagttgccttatacaagcctcttatagccggt
tctaaagtttctgaaagaattgatacaatcatcaaaagcctcttgctttctccaatgcct
gctcaggacttagctgtgatggaaagcatgcagttggctttagaaaatgttgtaagcact
attttcgatggatcaaatgaaattgccgggggtcattctgaagttcaacttggactatgc
agaatatttgaaggtttgcttcagcaacttctttctttgaaatggactgagccagctctt
gtggaagtacttgggcactacttggatgcaatgggttcatttttgaagtattttccggat
gccgtgggcagtgtcattaataaattatttgagctcctaaattcgctcccttttgttgtt
aagcaggatccatctacaagtagtgcacggtatgcaaggctgcaaatctgtacatcgttt
attcgtatcgccaaaactgctgacacaagtgttctgcctcacatgaagggtatagccgac
accatggcgtatatgaaaagagaaggttctttacttcgtggtgaacacaatctcttaggt
gaagcgtttcttgtcatggcttctgctgctggaattcagcagcagcaagaagttctggcc
tggttactagaacctttaagccagcaatggacacagattgagtggcaaaataattatcta
tctgaaccacttggtcttgttcgcttgtgctccgagaccccagttatgtggtcagttttc
cacactatcacattctttgagaaggcacttaagagaagtggaaccagaaaagcccagtca
aatctacaacacaattcaacagaaagttctatgcccttgcacccaatggcttctcatcta
tcatggatgctgccacctcttccaaaactgtttcgtgtcttacattccctttggtctcca
tctgtattccaaatattacctggagagattaaagctgcaatgaccatgagtgatgttgag
aaattcagtcttcttggtgaaggaaaccctaaattgctaaagggtaccatagccttcgcc
aatggatcccatatcagcacaagtaaggaaggatatgtggagtcaaatgaatcagacata
cgaaattggttgaaaggtatcagagacagtgggtacaatgtattgggcctggcaaccact
attggggactcattttacaaatgtctggatagtcaatctgttgctctagctctagtggag
aatatacattcaatggaattcaggcatatccggctgcttgttcattcagttttgattcct
ttggttaaattttgtcctgtggatttgtgggaggcatggttggaaaagctcttgctccca
ttatttcaacactgccaacaggctctcagttgctcatggtccggtcttctacatgaaggg
agagcaaaggtcccagatgcccatgccatactagctgggtcggacttaaaagtggaagta
atggaagaaaagctacttagggatctaacacgggagatttgttcactcctctctgttata
gcttcgccgcagctaaatactgggcttccttccttggagcactctgggcatgttcatcgt
gttgacgtatcttccctcaaagaattggatgcattcgcatcaagctccatggttggtttc
cttttgaagcacaaaggcattgcccttccagcgctgcagatatgtttagaagcttttaca
tggacagatggtgaagccatgacaaaagtttcttccttctgttcttctttgattggttta
gcggtatcgacaaatagtgtggagctcctacaatttgtttctaaggatctattttctgca
attatccaaggtttagcccttgagtcaaatgctttcatcagtgccgatttgattggtcac
tgtcgtgatatatacatacatctttgcgatagagatccaactcctaggcagattctgctc
tcgctcccttgtatcaaacaacatgatttgcttgcgtttgaagaagctttgacgaagaca
tccagtcccaaagaacaaaagcaacatatgaaaagcttgcttgtcttagctactggaaac
aagttaaaggcgcttgctgttcagaaaagcgtcaatgtcataacgaatgtatcaacgagg
cctcgcagcacggccaacaccaaagaaaccagagtggacgatggagagactgttgggctg
gcagccatattgtga
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