KEGG   Malus sylvestris (European crab apple): 126619535
Entry
126619535         CDS       T09027                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03030  DNA replication
msyl03410  Base excision repair
msyl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126619535
   03410 Base excision repair
    126619535
   03450 Non-homologous end-joining
    126619535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msyl03032]
    126619535
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126619535
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126619535
DNA replication proteins [BR:msyl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    126619535
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     126619535
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     126619535
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126619535
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2 PM2_P3 DUF3231
Other DBs
NCBI-GeneID: 126619535
NCBI-ProteinID: XP_050143887
LinkDB
Position
4:complement(26392019..26396728)
AA seq 416 aa
MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGE
VTSHLQGMFSRTIRLLEAGIKPLYVFDGKPPELKKQELAKRYSKRADATDDLAAAVEDGN
KEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAVLCKSGKVYAVASED
MDSLTFGAPRFLRHLMDPSSRKIPVMEFDIAKVLEELNLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIENILENINKERYQIPEEWPYQEARRLFKEPVALSDEEQVEIKW
TAPDEEGLIAFLVNENGFNSDRVAKAIEKIKAAKNKSSQGRLESFFKPTANPSVPIKRKG
SKCVLKCPKPATRHKMFFLQDCNPSRPTVIGSISLPILHLGSKHLMPLAKGVCFGT
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgggtataaagggtttaacgaagctgctggcggacaatgccccgaaggccatgaaggag
cagaaattcgagagctatttcggccgaaagatcgccatcgatgccagcatgagcatttac
cagttccttattgttgtgggaaggactgggactgagatgctcaccaatgaggctggtgaa
gttactagtcatctgcaaggcatgttttcacggacgattaggcttctggaagctggaatt
aaaccactctatgttttcgatgggaagcctccagagttgaagaaacaagagctggcaaag
cgttactcaaagagggcagatgccactgatgatttggcagcggctgtagaggatggcaat
aaggaagacattgagaagtacagtaaacgaacagtaaaggtgacaaagcagcacaatgat
gactgcaaaagacttctcaggctcatgggggtgcctgtagttgaggccccctcagaagca
gaggcacagtgtgctgtactttgtaaatcaggaaaggtttatgctgtggcctctgaagac
atggattcccttacatttggagcgcctaggtttcttcgtcatttgatggatcctagctca
aggaaaatccctgtcatggaatttgatattgctaaggtgttggaggagctaaatcttacc
atggatcaattcattgacttgtgcattctgtccggatgtgattattgtgacagcattcga
gggattggaggacagacagctttgaagcttatccgtcagcatggctccattgagaatata
ctcgagaacataaacaaagaaaggtaccaaataccagaggagtggccctatcaagaggct
cggagactttttaaggaaccagttgctttatctgatgaagaacaagttgagattaaatgg
acagctccagatgaagaaggactgattgcatttttggtgaatgaaaatggatttaacagt
gacagagtggcaaaggcaatagaaaaaattaaagcagccaagaacaagtcatcgcaggga
agacttgaatcatttttcaagccgactgctaacccatctgtgcccattaaacgaaaggga
agcaaatgtgtgcttaaatgtcccaaaccagcaaccaggcataagatgttctttctacaa
gattgtaatccatcgaggcccactgtcattggcagcataagtctgccaattcttcatttg
ggctccaagcacttgatgccattagccaaaggcgtctgttttggcacatga

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