Malus sylvestris (European crab apple): 126619749
Help
Entry
126619749 CDS
T09027
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126619749
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126619749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
126619749
NCBI-ProteinID:
XP_050144120
LinkDB
All DBs
Position
4:complement(17547752..17550589)
Genome browser
AA seq
529 aa
AA seq
DB search
MQKMSGDGFSINMSSAIDGFAQDHQLNDNPSGGLKPNPPNAVAKKKRNLPGTPDPDAEVI
ALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRLNKEVKKKVYICPEKT
CVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDC
GTLFSRKDSFITHRAFCDALTEESARLTTSSVTGVHTNLNFGNDAMLNNPMMNNSQAVVQ
DASQISMQYGQGLMRQDFNGLDQLHQHEKPRLSLWLNQQATSNSNQVNLIDDMQANPNHP
LYVTSSSSNAFPEMVQMPSASNNVNLFGSSNSMPTFGASTSGANLSLSPGQESGTSKLIG
KNSNLVGSGVSKPPAAPMSATALLQKAAQLGSTRSSNNQGSSLGVNVMSSSSSSRGFSNL
NQNRSNELHQVVQNAHQSGGGSANLSSLTSSSSNTSATTLEQLMNTIQRGPSNIGSIDHQ
NSLTRDFLGMGGAGGGEHIDQLSHTNRQIFFPQDLAKFASSMSQFTRNH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatgtccggtgatggtttttcgattaatatgtcatccgccattgacgggttt
gctcaagatcatcaactaaatgataaccctagcggcggcctaaaacccaatcctcctaac
gccgtcgccaaaaaaaagagaaatctcccgggaacaccagatccagatgctgaggttatt
gccctatctccgacaaccctaatggcaacaaaccggttcgtctgcgaaatatgcaacaag
ggtttccagagagaccagaatttgcagcttcacagaaggggtcacaaccttccctggaag
ctcaagcagcgactgaacaaggaggtgaagaagaaggtttatatttgccccgagaagacc
tgcgtccaccatgacccgtcgagagctcttggagacctcaccggaataaagaagcatttc
agcagaaaacatggagagaaaaagtggaagtgtgagaagtgttcgaagaaatatgctgtc
caatcggattggaaagctcactccaagacctgtgggactagagagtacaagtgtgactgt
ggaaccctcttttccaggaaagatagcttcatcacacacagagcattttgtgatgcccta
actgaagagagtgctaggctcactacttcatcagttactggagttcatacaaatctcaac
tttggaaatgatgcaatgttaaacaatccaatgatgaacaatagtcaagcagtagttcaa
gatgcgtctcaaatttccatgcagtatgggcaaggtttgatgaggcaagatttcaatggc
ttagatcagcttcatcaacatgagaagccaagattatcactttggttgaatcagcaggca
accagtaattctaatcaggttaatctgatagatgatatgcaagcaaatcctaatcatccg
ctttatgtaacatcatcaagctctaatgcttttcctgaaatggtgcaaatgccatcggct
tccaacaatgtcaatctttttggctcatctaattccatgccaacttttggagcttcaaca
agtggtgcaaatctctctttgtcaccgggtcaagaaagcgggactagtaagctcattggg
aaaaatagtaatttggtgggcagcggcgtgtccaagccaccggctgccccaatgtcagcc
acagcacttttacaaaaagcagctcaattgggttcgactagaagcagcaacaaccaaggc
agcagcttgggtgtaaatgtaatgtcctcatcatcttcttccaggggcttctcgaatttg
aaccaaaatcgatcgaacgagcttcatcaagttgtacaaaatgcacatcaatcaggtggt
ggtagtgcaaatttgagttcattaacaagttcatcatcaaataccagtgctactacactt
gagcagctaatgaatactattcaacggggtccgagcaatatcggaagtattgatcatcaa
aacagtctaactagggactttttgggcatgggaggagcaggaggaggagaacatattgat
cagttatcccataccaataggcaaatattttttccacaagatctagccaagtttgcatct
tcaatgagccaattcactcgcaaccactag
DBGET
integrated database retrieval system