Malus sylvestris (European crab apple): 126619883
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Entry
126619883 CDS
T09027
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126619883
Enzymes [BR:
msyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
126619883
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
126619883
Prokaryotic type
126619883
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
126619883
NCBI-ProteinID:
XP_050144259
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All DBs
Position
4:29076297..29082670
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AA seq
716 aa
AA seq
DB search
MWLKPAPSCFSMLKPYRSATPPPPPPPTTALKALMATKTTEESDVGIFCYISQLPGFRGV
LKQRYSDFMVNEVDKEGNVVHLTNLDAPVEAVKESGTTTSDGASKDYTTEIESFRALADP
NDAERLETLINQINSSSDDGVMPIVLSPDYDKSHRTAVHNFFKQHFKFLVTDTVDGPDAS
SKCIRVRINSGGQSNRGRNSRKRKERGDKPFDSRGSEDWSEHVGKFLRFHLYKENKDTQE
ALGVIGKMLGVQPRSFGFAGTKDKRAVTTQRVTVFKKLASKLAALNDRLIGIKVGDFCYV
TEGLVLGQLLGNRFTITLRGVVADSEDTIKASASALGKQGFINYFGLQRFGSGSVPTHRI
GASLLRGEWKSTVSMFLDPREGERNVITEAREYYKETNDIEGTLRKLPRHLVSERAILQC
LKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNNAASMRVKKYGTDRVVLGDLVYCKGNE
TEKVTEVVTSECIDENGDDMLDPNDLGDIAETNLPEEKLNLVKAVTAEDIRSGIYTIEDV
VLPMPGSRVIFPENDIADVFHDLAKKDAISLTESVHNVKEFSITSVTGNYRRVFQKPMDF
EWEILKYGDGNVPLVDTDLDKISKAKPAKVDKEDPSSVNGDGSLHDSAKQSECIDNDIGD
TGEKVPDVGSLSDTNPQETQMALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaagcccgcaccatcgtgcttctctatgctaaaaccctaccgctctgcaact
cctccaccaccaccaccgccgaccaccgccttaaaagccctaatggcgacaaaaaccacg
gaggaatccgacgttggcatcttctgctacatctctcagctccccggatttcgcggcgtc
ttaaagcaaaggtattcggattttatggtaaacgaagtagataaggagggaaatgttgtt
catttaaccaacttggatgcgccggtagaggcagttaaggaaagtggaacaacgacaagt
gatggtgcaagtaaagattatactaccgaaattgaatcgtttagagctcttgctgatcct
aatgatgctgagcgcttggaaactcttatcaaccaaattaattccagtagtgatgatggt
gttatgcctattgttctttccccagattatgataaatctcatcgaacggcagtgcacaat
ttttttaagcagcacttcaagttccttgtcaccgacacagttgatggaccagatgcttca
tcaaaatgcatccgggtgagaataaattcaggaggacagagcaacagaggcagaaattcc
agaaaaagaaaagaaagaggtgataaacctttcgatagcaggggttcagaggattggtcg
gagcacgttggcaagttccttaggtttcatctttacaaggagaacaaggatacacaggaa
gccttaggagttataggaaaaatgcttggtgtccagccaaggtcctttgggtttgcgggt
acaaaggataagcgtgctgtcacaactcagagggtaaccgtttttaagaagcttgcaagt
aaattagctgctcttaatgataggttgatcggtatcaaagtaggtgacttctgttatgtg
acagaaggacttgtccttggccaactcttgggaaatcggtttacaattacattgagagga
gttgttgcagattctgaagataccatcaaagcctccgcaagtgccttgggaaagcaggga
tttattaactactttggtttacaacgatttggaagcggttctgtgccaactcaccgtatt
ggagcttcactactcagaggagagtggaaatctaccgtaagcatgttccttgatccaaga
gaaggggaaaggaatgtgattacagaggcacgagaatactataaggaaactaatgacatt
gaagggaccctgaggaaattacctcgacatctggtttctgaaagagctatattgcagtgt
ctgaagaaatgccccggaaactacttgcaggccttgaaagctattcctagaactttgagg
atgatgtatgtgcatagttaccaaagctatttgtggaacaatgcggcaagtatgagagtg
aagaaatatggaactgaccgagttgtgttgggagacttggtatattgtaaaggaaatgaa
actgaaaaggtgactgaagttgttacttctgagtgcatagatgaaaatggtgatgatatg
cttgatcctaatgatttaggtgatatagctgaaacaaatcttcctgaggaaaagcttaat
cttgtgaaggctgtaactgcagaagatatccggagtggaatttatacaattgaggatgtc
gtccttcctatgcccggttcaagggtcatttttccagaaaatgatatcgctgatgtcttc
catgatttggcaaagaaggatgcaatcagcttgacagagagcgtacataatgtcaaggaa
ttctcaataacaagtgtgacaggaaattataggcgggtcttccaaaaaccaatggacttt
gaatgggaaatactaaaatatggtgatggtaatgtacctttggtggatacggacttggac
aaaatttccaaagcgaaacctgctaaggtagacaaagaggatccgtccagtgtaaatgga
gatggaagtttgcatgacagcgcaaaacagtcagagtgcattgacaacgatattggggac
accggagaaaaggtgccagatgttggatctctcagcgacactaatcctcaggaaactcag
atggctctcaagttgagctttactctcccagcttcatgttatgcaacaatggcaatccga
gagcttctgaagacatcgacatctgttgcgtttcacaaaacgctaaactag
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