Malus sylvestris (European crab apple): 126619949
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Entry
126619949 CDS
T09027
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
126619949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
msyl03051
]
126619949
Proteasome [BR:
msyl03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
126619949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_2
AAA_22
nSTAND3
PRS7_OB
DUF815
AAA_7
TIP49
Parvo_NS1
AAA_14
Prot_ATP_ID_OB_N
RNA_helicase
Mg_chelatase
AAA_18
Sigma54_activat
IstB_IS21
AAA_25
AAA_28
AAA_3
TsaE
AAA_33
AAA_24
AAA_lid_PRS2_C
NPHP3_N
ATPase
NACHT
bpMoxR
ABC_tran
AAA_11
ATPase_2
PhoH
ResIII
AAA_30
Sec8_N
Motif
Other DBs
NCBI-GeneID:
126619949
NCBI-ProteinID:
XP_050144342
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Position
4:22809833..22813170
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AA seq
400 aa
AA seq
DB search
MTTETSEDAVRRRTAVFDYRKKLLQHKELDSRVRAVRENLRTARKEFGKTEDDLKSLQSV
GQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLVTGTRVVLDMTTLTIMRALPR
EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY
GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD
EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFEQLGKVKMIMATNRPDVLDPALLRPG
RLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMS
AIRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagagacatcagaggacgccgtacgccgtcgcactgcggttttcgactaccgc
aaaaagttactccagcacaaggagctcgactcccgagttcgcgcagtgagagagaacttg
cggactgcaaggaaagaatttgggaaaactgaagatgatttgaagtcccttcaaagcgtg
ggacagattattggtgaagttcttcggcctctcgataatgaacgcctgattgtgaaggcc
agtagtggtcctagatatgtcgttgggtgtcgcagtaaggttgacaaagaaaaactagta
actggcactcgcgttgttttggatatgacgactttgacgatcatgcgggctcttcccaga
gaagttgatcccgttgtatataatatgcttcatgaagatcctggtaatgttagttactcg
gctgtgggaggactatcagatcagatccgagaacttagagaatccatagaactgccgcta
atgaatcctgaactttttcttagagtggggatcaaacctcccaagggtgttcttctgtat
ggtcctccgggaacagggaagacattactagccagagcaattgctagtaacatagatgct
aactttttaaaggttgtatcaagtgccattattgataaatatattggtgaaagtgcaaga
ttgataagggaaatgtttggttatgcccgtgatcaccagccttgtatcatttttatggat
gagatcgatgctattggtggacgacgttttagtgaagggactagtgcagaccgagaaatt
cagcgaactctcatggagttgctgaaccagttagatggatttgaacagcttggaaaggtg
aaaatgatcatggcaactaataggcctgatgtcctggatcctgcacttctgcgtcctggg
cgactcgaccgcaagatagagatcccattacctaatgagcaatcaagaatggaaattctc
aaaatccatgccgccgggattgccaaacatggggaaattgattatgaggcagttgtgaag
cttgctgagggttttaatggagctgatctccgtaatgtctgcactgaagctgggatgtct
gcaatccgtgcagagagggattatgtcatccatgaagatttcatgaaggctgtacggaaa
ctgaacgaagcaaagaaacttgaatctagttcccactacaacgcagattttgggaaggaa
tga
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