Malus sylvestris (European crab apple): 126620213
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Entry
126620213 CDS
T09027
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126620213
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126620213
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126620213
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Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
126620213
NCBI-ProteinID:
XP_050144683
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Position
4:complement(19758004..19763885)
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AA seq
622 aa
AA seq
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MMNSAEPIQKMDTSDNKSIDQTRSLSEEILELAKRSKESTLESTLSLFETFEYGRRKSDK
RDGKDGSEWSIESTIAIMLQISYLIIVMVYIGPMLVDPLFLYVPIINENIKCLALDEKLK
KTAIVLRSIIDVPYLYNTILHVLSVLQALRSTDRNSYWWREAGRLFHPEFLLHNILPVLP
IPQIVILIFLPKMRGSRSLNGMKFLNLLILLQYVARACPIFTFCKNYNKSTRELSNNIAM
RKKIWIPGLLNFIMYILASHVLGAFWYFFSIQREIDCWISTCRSENECDLSTLQCDNTTF
RNITFLHDLCPTNPPNPVVFDFGIFLNTLQSGIVGTTDFPQKFLMCFSWGLRNLSSFASN
LNTSTYAWETVFVIFISMSGLVLFIYLLGHLQTFMQATTRTYRIRLRKKVIFQQIRFMLS
EYRIPDNLPNPDSREPVAEAIWELVREALEKDEDLPVKNIFSLLPNELKEHIKNHLFLAK
LKKVRGLENKDGEVLKKIMGYLEPVNYADGSYIIREGEPLDRMLFITQGSVLTYKTTIGG
GSGSSSIIRRDFYGEELIGWAKAYNSLSDFPISAKTVKSRTEVEVFVLMADHLQLVVSEF
RTQSNREIPQPADSAPVQISIS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactctgctgaaccaattcaaaaaatggacacctccgataacaagtcaatcgac
caaacaaggtcgttaagtgaggaaattttagagcttgcaaagagatcaaaggaatcaaca
ctagaatcaacattatcattatttgaaacgtttgagtatggaaggaggaagtctgataag
agagatggaaaagatggatcagagtggtcaatagagtcaacaattgcaataatgttacag
atatcgtatctgatcatcgtgatggtttatattggccctatgcttgtggaccctttgttc
ttgtatgttcctatcatcaatgaaaatatcaagtgtctcgcgttggacgaaaaattaaaa
aagacagctattgttttgcgatcaattatagatgtcccttacctatataataccatcctt
catgtgctgtctgtgttgcaagcattgagatctacggacaggaacagttactggtggaga
gaagcaggtcggctttttcacccagaattcctacttcataacattttacctgttcttcct
attccacaaatcgtaattttaattttccttccgaaaatgaggggctcaagatcgttgaat
ggaatgaagtttttgaacttacttattctattgcaatatgttgcacgagcttgtccaata
ttcacattctgtaagaactataacaagtcaacacgtgaacttagcaacaacattgctatg
agaaagaaaatatggattccaggtctattaaatttcatcatgtacatccttgctagccat
gtactcggggcattttggtattttttttctattcaacgagagatagattgttggatttct
acttgtcgaagtgaaaatgaatgtgacttaagtactttgcaatgtgataatactacgttc
agaaatatcacatttctacatgatttatgtccaacaaatccaccaaatccagtggtattc
gattttggcatattcctaaacactctccagtctggcatagtgggaacaacagattttcct
caaaaattcttgatgtgtttctcatggggcttacgaaatctaagttcttttgcttcaaat
ctcaacactagtacctatgcatgggaaaccgtcttcgtaatttttatttcgatgagtggc
ctagtactattcatatatctgcttggacatttgcagacatttatgcaggcaactaccaga
acatataggatacggctgaggaagaaagtcatatttcaacaaatacgtttcatgttatct
gaatatcgcatccctgataaccttccgaaccctgattcccgtgaacctgtagctgaggcg
atttgggaattagtaagagaagcgcttgaaaaggacgaagatcttcctgtgaagaatatc
ttctctttacttcctaatgaacttaaggaacatattaagaaccatctcttcttggctaaa
ctaaagaaagtgcgagggcttgaaaacaaagatggagaagtgttgaaaaaaatcatggga
tatcttgagccagttaactatgctgatggtagctatattattcgagagggggagccactg
gataggatgcttttcatcacgcagggcagtgtacttacctacaagactactattggcgga
ggaagtggctcgtcaagcattatacgtcgtgatttttatggagaagaacttataggttgg
gcaaaggcatataactccctttccgactttcccatctcagccaaaactgtcaagtcccgc
actgaagttgaagtctttgttctcatggctgaccatttacagcttgttgtctctgaattc
cggacgcagtccaacagagagatcccccaaccagcggatagtgctcctgtgcaaataagc
atctcttag
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