Malus sylvestris (European crab apple): 126620269
Help
Entry
126620269 CDS
T09027
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
126620269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126620269
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
126620269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
TIMELESS_C
Motif
Other DBs
NCBI-GeneID:
126620269
NCBI-ProteinID:
XP_050144743
LinkDB
All DBs
Position
1:complement(16660114..16662803)
Genome browser
AA seq
649 aa
AA seq
DB search
MEEEEGGKVRVLIENATISIEPEVDPRLLKAIKSVVRYSDSELRLAARILMDLMKREHSQ
VRYLTLLIIDELFMRSKLFRALVVENLDQLLTLSVGFRIRSSLPPPENVATALRKKAIEF
LEKWNSSFGVHYKQIRLGFDYLRNTLKYQFPNLQETATRLEQQRRERERKTKKILLNKFK
NLGNNFASIKEEIQSTIDEIGECLEIVRPKEEGVPLCPLDDEDMEEFHSYEFRQLRLHAL
EEGEKVHENSENKVVFDALRELYKILVKHLAAVQEWVLVLVKVELTDNRSRDSYLKEFID
IRNNIQSVKKKCEEAGCTLSNTANHEEEIFWEEGKIETTEGGRSSLPSNKPGGLAVASTP
KEVQGRLPKRYDNPKCQDNEGDGSKRLSCEGGGSNSDPLRSKLLAEAPEVNWSTHLASWG
SKRDVLANHRGLEVESHWGRVDQDAVIPAEKIAELNLQATVYKEKQVEIQPCRAPLSNGK
LCPRRDLRICPFHGPVIPRDDEGKPLNQNPPKDENYLGTDLVEQLVKQAVQNVREKDKEL
SRKREIDKKALKRARLAKIREHNEAVLRDAAVASTSNSAFIGEDWEPSTSRNTSFRNKKK
TLASLLQKKETPKDRLARRILNTRASAATGRQLTLGEDAYYREAFPNQW
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggaaggagggaaggttagggttttgatagagaacgcgacgatctccatc
gaaccggaggtcgacccacgcctcctaaaagccatcaagtcggtggtccgttactccgat
tcggagctccgactcgccgcccgtattctcatggatcttatgaagcgcgagcactctcag
gtgcggtacctcacactacttataattgatgagctttttatgaggtcaaagctctttaga
gctcttgttgtggagaatttggatcaattgctgactttaagtgtcgggtttcgtatacgt
tcgtcgctcccacctccggaaaatgttgcaactgctctgcgtaagaaagcgattgagttt
ctggagaagtggaattcttcatttggggttcactataagcagattagattagggtttgat
tacctcaggaacacccttaagtatcagttcccaaatctacaggaaactgcgactcggctt
gagcagcagagaagggaaagggagaggaagacgaaaaagatcttattgaacaagtttaag
aatttgggaaataattttgcatcaattaaggaagaaatacagtcgactattgatgagatt
ggggagtgtttagaaattgtacgccccaaagaggaaggtgtgccgttgtgtcctttagat
gatgaagatatggaggaatttcattcttatgagtttcggcaattgcgcttacatgcattg
gaagaaggagaaaaagttcatgagaatagtgagaacaaagtggtttttgatgccctgcgg
gagctttacaagatattggtaaagcatttggctgcagtgcaagaatgggtccttgttctt
gtaaaagttgaactgactgataacaggtccagagattcgtatttgaaggagttcattgat
atccggaataatattcaatcagtgaagaagaagtgtgaagaagcgggatgcactctttca
aacactgcaaatcatgaggaagaaattttttgggaagaaggcaagattgaaacaactgag
ggtgggaggtctagtcttcccagtaacaaaccgggaggtctagctgtggcatcaacaccc
aaggaggtgcaaggtagacttcctaaacgctatgataatcctaaatgccaggataatgag
ggcgatggcagtaaaaggctcagttgtgaaggtgggggaagcaattcagaccctctgagg
agtaagcttctggctgaagctccagaggtgaactggagcactcatttggccagttggggt
tcaaagagggatgtattggctaaccatcggggcttggaggttgaaagtcattggggcagg
gtggatcaggatgcagttattccagcagaaaagattgcggagttaaatcttcaggctact
gtatacaaagaaaagcaggttgaaattcagccatgccgagcaccattaagcaatggaaaa
ctttgtccgagaagagacttgagaatttgcccatttcatggacctgttatacccagagac
gatgagggaaaaccactgaatcagaaccctccaaaagacgagaattatttagggaccgat
ttggtagagcagttggtgaaacaagccgtgcagaatgttcgtgagaaagataaagagttg
tcaaggaagagagaaatagataaaaaggcactgaagcgtgccaggcttgccaaaatacga
gaacacaatgaagcggttttacgagatgctgcagtcgcttcaacttctaactctgcattt
attggagaagattgggagccaagtactagtaggaacacatcattcagaaacaaaaagaaa
acccttgcttccttgctgcagaagaaagagacaccaaaagatagattagctcggaggatt
ttgaatacacgagcaagcgctgccactggaagacaacttacattgggcgaggatgcatat
taccgagaagcctttccgaatcagtggtaa
DBGET
integrated database retrieval system
