Malus sylvestris (European crab apple): 126620660
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Entry
126620660 CDS
T09027
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126620660
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
126620660
Meiosis-specific proteins
Cohesin complex and associated proteins
126620660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
CCDC18_2nd
CCDC39
ABC_tran
TMF_TATA_bd
CC_Bre1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
126620660
NCBI-ProteinID:
XP_050144836
LinkDB
All DBs
Position
5:32016513..32026099
Genome browser
AA seq
1218 aa
AA seq
DB search
MPSLVSQGKILRLELENFKSYKGFQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
HLRGAQLKDLIYAFDDREKDQKGRRAFVRLVYQLASGSELQFTRAITGGAGSEYRIDGAS
VTWEEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYEKY
EEEKSEAEQKASLVYQRKRTIVLERRQKKEQKEEAEKHLRLQDQLKSLKKEHSLWQLFNI
EKDIAKMTEELEAEKKSREQVMQEIDEFQLEANNKKKEQAKYLKEIAQCEKKISDRNSKL
DKSQPDLLKLKEEMSRINAKIKKSEKELAKKEQERKRHKEDIKQLQKGIQDLTAKLEDLH
EQGRDSGDKLKLDDTELREYFRIKEDAGMKTGRLRDEKEVLDRQQHADLEAQKNLEENLQ
QLRSREAELEEQEEQMQTRQKKIKENSAKHRDEAKNLDNELHAMQSKNSQARTKYENLKS
KIDEIDKQLRELKADRYENERDSRLSQAVETLKRLFHGVHGRMTELCRPTQKKYNLAVTV
AMGKFMDAVVVEDEQTGKECIKYLKEQRLPPQTFIPLQSVRVKPVMERLRNLGGTAKLIF
DVVQFDPALEKAILFAVGNTLVCDELDEAKRLSWTGERFKVVTVDGILLAKSGTMTGGTS
GGMEARSKQWDDKKVEGLKKKKEQFESELEELGSIREMQIKESETTGRISGLQKKIQYAE
IEKKSIKDKLATLAREKQNIKEEIDRSSPELLKLKQAVDKRSKEINKLEKRINEIVDRIY
KDFSKSVGVANIREYEENQLKASQYMAEERLSLSSQLSKLKYQLEYEQNRDMESRINELQ
DSISKFKKALERVQKEEAAAKSAAEKASGEIDQWKKEIQEWKSKSEGCEKEIQEWNKRGS
TATTSLSKLNRQIHAKESQIEQLMSQKQEIVEKCELEQINLPIISDPMEIDSSPMGPVFD
FSQLNKSHMRDRRPSEREKLEVEFKQKMDAVISEIEKTAPNLKALDQYEAIKEKERAVTE
EFEVARIEEKEKTDMFNSVKQKRYELFMDAFQHISSNIDKIYKQLTKSNTHPLGGTAYLN
LENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVD
AALDNLNVAKVAGFIRSKAREGARANQDDEGGSGFQSIVISLKDSFYDKADALVGVYRDC
ERSCSETLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctggtctctcagggcaaaatcctccgcctggagctcgagaacttcaagtcc
tacaagggcttccagaccatcggccccttctacgacttcactgcgattattgggcccaat
ggcgccggaaagtccaacctcatggacgccataagcttcgttctcggcgtgcggacgggc
cacctccgcggggcccagctcaaggacctgatctatgccttcgacgacagggagaaggac
cagaagggccgcagggcctttgtccgcttggtttaccagctggccagcgggtcggagctc
cagttcacccgagccattaccggcggagcgggcagcgagtaccgtatcgatggggcgtct
gtgacgtgggaagagtacaatgcgaagctcaggtctcttgggattcttgtcaaggcccgg
aatttcctcgtctttcagggcgatgtggagtctattgcctccaaaaatcccaaggaactt
actgcacttcttgagcagatctccgggtctgatgaactcaagagagactatgaaaaatat
gaagaagaaaaatccgaagctgaacaaaaagcaagtcttgtttatcagagaaagagaaca
atagtattggagaggaggcaaaagaaagaacagaaagaagaagctgagaaacacctccgt
ctgcaagatcaactgaaatctttgaagaaagaacattctttatggcaattgttcaacata
gaaaaggatattgcaaaaatgactgaggagcttgaagctgaaaagaaaagccgcgaacaa
gttatgcaagaaattgatgagtttcagctagaagcaaacaataagaagaaagaacaagca
aaatatctgaaagaaattgcacaatgtgaaaagaagatttcagatagaaatagtaaactt
gacaaaagtcaaccagaccttctgaaactgaaagaggaaatgtctcgtataaatgcaaaa
atcaagaaaagtgagaaggagcttgctaagaaagaacaagaaaggaaaagacataaagag
gatataaaacagctgcagaagggaatacaggatctgactgcaaaactagaggatttacat
gaacaaggccgagatagtggcgacaaactgaagttagacgatactgaattaagggaatac
tttcgaatcaaggaagatgctgggatgaaaactggaaggctaagagatgagaaagaggtc
ctggataggcaacaacatgctgatcttgaagctcaaaagaatttggaagaaaatcttcaa
cagttgagaagtcgggaggctgaattagaggaacaagaggaacaaatgcaaacaaggcag
aaaaaaattaaagaaaattctgcgaaacatagggatgaagctaaaaatctggataatgaa
ctgcatgccatgcaatctaaaaattcacaggccagaacgaaatatgaaaatctgaagtca
aaaattgatgaaatagataagcaactacgggaattgaaggctgacagatatgagaatgag
agggattccaggttgtctcaggcagtcgagactctcaaacgcctgtttcacggtgtccac
ggtcgtatgactgaactctgtaggccaacacagaaaaagtataacctcgctgttactgtt
gccatgggtaaatttatggatgcagttgtagttgaggacgaacaaacgggaaaggaatgc
atcaagtatttgaaagaacaaaggcttccccctcagacattcatacctcttcagtctgtc
cgtgtgaagcccgtaatggagagattgcgcaacttaggtggtactgcaaagctgatcttt
gatgtagttcaattcgatcctgccttggagaaggcaattctttttgcggttggcaatact
cttgtctgtgatgaacttgatgaggctaagcgtctcagctggactggtgagaggttcaaa
gttgtaactgttgatggaattctgcttgccaaatctggcacaatgactggcggtacaagt
ggtggaatggaagcaaggtcaaaacagtgggatgataaaaaagttgaaggactaaagaag
aagaaagaacaatttgagtcagagttggaagagctggggtcaattagagagatgcagata
aaagagtcggagacaactggtagaattagtggactccaaaaaaaaatccagtatgcagag
attgagaagaaaagcatcaaggacaaacttgcaaccttggcacgggaaaagcagaatata
aaagaggagattgatcgcagcagtcctgaacttcttaagttaaagcaagctgtagataag
cggagcaaggaaatcaataagcttgagaagaggataaatgaaattgttgacagaatctac
aaagattttagtaaatctgttggggtggcaaacatccgtgagtatgaggaaaatcaactc
aaggcttcccaatatatggctgaagagaggcttagtttgagtagccagctgtcaaagttg
aaataccagttagagtatgagcaaaaccgggacatggaatcacgaattaacgaactccaa
gattctattagtaaatttaaaaaagctttagaacgggttcagaaggaagaggctgcagcc
aagtcagcagcagaaaaagcttctggtgagattgatcagtggaagaaagaaatacaagaa
tggaaatccaagtcagaagggtgtgagaaggaaatccaagaatggaacaagcggggttct
acagctacaacaagtttatccaaacttaatcgacagatacacgctaaggagtcacagatt
gagcagctgatgtcacagaagcaggaaatagtagagaaatgtgaattagaacaaataaac
cttcccatcatctcagacccaatggagattgattcctccccaatgggcccagtcttcgat
tttagtcagttaaacaagtctcatatgcgggacagaaggccctctgaacgggagaagctt
gaggtggaatttaagcaaaaaatggatgccgtaatttcagaaattgaaaaaacagctcca
aatttgaaggccctggaccaatatgaggcaataaaagaaaaggaaagagctgttactgaa
gagtttgaagtggctagaatagaagagaaggaaaaaactgatatgtttaactcagttaag
cagaagaggtacgagttgtttatggatgccttccaacatatttccagtaacattgataag
atatacaaacaactgacgaagagcaacacacatccactgggtgggacggcatatttaaat
ttggaaaatgaagatgatccatttttacatggcattaagtacactgctatgcccccaaca
aagcgctttcgtgatatggaacaactatctggtggcgagaaaactgttgcagcattggca
ttactcttttccatacacagttttaggccttcaccgtttttcatactggatgaagtcgat
gctgcactagataacttgaatgttgctaaggttgctggattcatccgttcaaaggcacgt
gaaggagccagggctaaccaagatgatgagggaggcagtggttttcagagcattgtaata
tctctaaaagatagcttctacgacaaggctgatgctttagttggggtttacagggactgc
gaaaggagctgttcggaaactctgacatttgacctgaccaagtatcgggagtcgtga
DBGET
integrated database retrieval system
