Malus sylvestris (European crab apple): 126620731
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Entry
126620731 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126620731
KO
K19022
AP-5 complex subunit beta-1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126620731
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
126620731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
126620731
NCBI-ProteinID:
XP_050144962
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All DBs
Position
1:19579169..19584426
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AA seq
1149 aa
AA seq
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MSDKPPEAPSPSPPSPPPLRQLSPQDWESLIDDFQHGSARQHRWTSALPILLSLLDQAFS
SIAKRDFPLKLHVITFLEEFSDPLFATAIANDPVSGRKVLHRLIETLRALIQTPADGVHI
TFALKEQMMLSVTSVVVSLDDDVVPISTVESLVELLLTVINRPNHGVDRQARALACECLR
EMEKARPSLLSEIGGHLWSLCQNERTHAAQSYILLFTTVVHNIVVENLSVSILNTAVPLV
PFSSPKNGSGKESLGGLNYKELLRAMGFLLEWPQVLTPCAMVEFLALIMPMAAALELQTS
KLKVQFLGMLYSSDPMLCHIVLTMFPRFWDAFDGQEGDIARRLVLLSKESQHHLVFRLLA
VHWLLGFGQLVLRREVKKVKTIVDMGLRFYPSVFDPLTLKALKLDLLAFCFVCVDVLKPE
KSVSGEDGEVNDKLVVKLFGDGLVCVSAFKWLPPGSTETAVAFRTLHRFLIGASSHSDND
PSTTRSLMDSTIFRNIQGMLVDLMLECRRLVPVVVVLTDRLLGCQKHRWLGERLLQMFDE
HLLPKVKLDYSLVSFFPIFNRIAESETIPPRGLLELLTKFMAFLVGKHGPYTGLRSWSQG
SRVLAICRTLLMHHKSSRLFLTLSRLLAFTCLYFPDLEARDNARIYLRLLICMPGKKLRD
LLNLGEELSISPSSHSSFNVQAPHFCQSLKKSKTISSYVHLERVIPLLIKQSWSLSLSTL
GIGSNDPGYLEGIRDIEPIVEDSDIVDSSNVQITPEVQRIDDNGNVQIIPEDRRIDRPPE
PLRMMDSNISEILRTLRTHFSCIPDFRHMPGIKVILSCSLRFESEPFNRIWGVDSPAGGS
NELDTLPALYATVLKFSSSAAYGSISSYHIPFLLGEPPSKTNIPDQTASLAIVPVENGCG
KEESYRAPVTIELEPREPTPGLIDVSIGTSAENGQIIRGQLHTITVGIEDMFLKAIVPPG
IQKDSVPGYYLDLFSALWDACGTSNTAQETFQLKGGKGVTAISGTRSVKLLEVPASSLIQ
ATERYLAPFVVSVIGEPLVTVVKDGGIIRDIIWKDEASDSSLDITSSETNFDRGPLHLTF
GDDADERYGHVNTRKRNMGSILILIFLPPRYHLLFQMEVSDVSTVVRIRTDHWPCLAYTD
DYLEALFLA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataagccaccagaagcaccatctccgtcaccgccgtcacctccgccgttaagg
caactctctccccaagactgggagtcgctaatcgacgacttccagcacggcagcgcacgc
cagcacagatggacctccgctctgccgatactcctctccctcctcgaccaagccttctca
tccatcgccaagcgcgactttcccctcaagctccacgtcatcaccttcctcgaggagttc
tccgacccactctttgccaccgccatcgccaacgaccccgtttccggacgaaaagtcctc
caccgcctcatcgaaacccttcgcgccctgatccagacaccggccgatggggtccacatc
acgttcgcgctcaaggagcagatgatgctctccgtcacatccgtcgtcgtctctctcgat
gacgacgtggtaccgatctccaccgtcgaatcgctcgtggagctgcttttaacggtgatc
aaccgtcccaatcatggcgtcgaccgtcaggcgcgtgcgctggcgtgcgagtgccttcga
gagatggagaaagctcgcccctctttgctctccgaaatcggcggacatctctggagcttg
tgccagaacgagaggactcacgccgctcagagctacattctgttgttcaccaccgtcgtt
cacaatatcgttgtcgaaaatctcagcgtttcgattctcaatacggcggtgcctttggta
ccgttcagctctccgaagaacgggtcgggtaaggagagcttgggtggtttgaattacaag
gagttgttgagggcgatgggttttttgctggaatggccgcaagtgttgacgccgtgtgcg
atggttgagttcttggctctgataatgccaatggcggcagcattggagctccaaacttcg
aagctcaaggtgcaatttttggggatgctttattcgtctgatcctatgctctgtcatatc
gttttgaccatgtttccgaggttttgggacgcatttgatgggcaagaaggcgacattgcg
aggcggcttgtgctgctgtccaaagaatcgcagcaccacttggtttttcgattgctggcg
gtgcattggttgctgggttttggtcagttggtgttgagaagggaagtaaagaaagtgaag
accattgttgatatgggtttgagattctatccgagtgtgttcgaccccctcactttgaaa
gccttgaagcttgacctgcttgcattttgcttcgtttgtgttgatgtcttgaaaccagag
aagagtgtttcgggcgaggatggtgaggtgaatgataagttggtggtgaagttgtttgga
gatggacttgtttgtgtatcagcattcaaatggttgcctccagggagtactgaaaccgcg
gtggcatttcgaactttgcataggttcttgattggggcttcatctcattcagacaatgat
ccttctaccactagaagtctcatggactccaccatttttaggaatatacaggggatgctg
gtggacctgatgttggagtgtcggagattggttccggtggtagttgttttgactgatcgt
ttgttgggttgtcaaaagcaccgttggttgggagagcgcctgcttcagatgtttgatgag
catttgcttccaaaagtgaaattggattacagcttggtttctttctttccaatatttaat
agaattgctgaaagtgaaacaattcctcctcgtggattgctagagcttcttaccaagttc
atggccttccttgttggtaaacatggcccatatacaggactgagatcatggtcccaggga
agcagagttcttgccatctgtcgaaccttgttgatgcaccacaagagctctcgattgttc
cttacattgtctcgccttttggcatttacttgcctttactttcctgacttggaggctcgt
gacaatgcaaggatctaccttcggcttctgatctgcatgccaggtaagaagctcagggac
ctgctgaatcttggggaagaactcagtatttcaccgtcttcacattccagtttcaatgtc
caggctcctcacttttgtcagagtctcaagaagtctaagaccatctcctcatatgtccac
cttgagcgagtaatccccctactaatcaaacagtcttggtccttgtctttatcaactttg
ggtattggaagtaacgatcctggttacttagaaggcatcagggacattgaacccatagta
gaggatagtgatattgttgacagtagtaatgtccagattacaccagaagttcaaagaatt
gatgacaatggtaatgtccaaattatcccagaagatcgaagaattgatcgaccaccggag
ccattgcgtatgatggattcaaatatttcagagatattaagaacattgaggacgcatttc
tcatgcattcctgattttagacatatgccaggaattaaggttatactatcatgtagtttg
aggtttgaatctgagcctttcaatcgaatatggggagttgattcccctgccggtggttcg
aatgaattagatacccttcctgctctatatgcaacagtgctaaaattttcgtcctctgca
gcatacgggtccatttcatcatatcatataccttttcttctaggtgagcctcccagtaaa
acaaatatacctgatcagaccgcctcattagctattgttcctgtagaaaatggttgtggg
aaagaggaaagttatagagctcctgtaacgattgaattggaaccacgggaacccacgcct
ggtctgattgatgtttcaattgggacaagtgctgaaaatggtcagataatcaggggacag
cttcacactatcactgtgggcatagaggatatgtttctcaaggctattgtaccacccggc
atccagaaagattccgtacctggttattacttagatttgttcagtgctctttgggatgca
tgtggcacttccaacactgcacaggagacgtttcagttgaaaggaggcaagggggttacc
gctataagtggtactcggtcagtcaagctactagaagtccctgcatcgtctttgattcag
gctaccgagcgctatttggcacccttcgttgtaagtgtgattggtgaaccacttgttact
gtcgtaaaggatggaggaatcattagggacatcatctggaaggacgaggcctcagattct
tcccttgacattactagctccgagaccaattttgatagaggcccgcttcatcttacattc
ggtgacgatgcagatgaaaggtacggtcatgtcaatacccgcaaaagaaacatgggtagc
atactcattttgatatttcttccaccaaggtatcatctcctcttccaaatggaagtgtcc
gatgtttcaacggtagtacgaattcgaactgatcactggccgtgcttagcttatactgat
gattatttggaagcattatttttggcatag
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