KEGG   Malus sylvestris (European crab apple): 126620822
Entry
126620822         CDS       T09027                                 
Name
(RefSeq) ras-related protein RABF2b-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04144  Endocytosis
msyl04145  Phagosome
msyl04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126620822
   04145 Phagosome
    126620822
   04148 Efferocytosis
    126620822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126620822
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126620822
   04031 GTP-binding proteins [BR:msyl04031]
    126620822
Membrane trafficking [BR:msyl04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    126620822
 Endosome - Lysosome transport
    126620822
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126620822
  Exosomal proteins of other body fluids (saliva and urine)
   126620822
  Exosomal proteins of colorectal cancer cells
   126620822
  Exosomal proteins of bladder cancer cells
   126620822
GTP-binding proteins [BR:msyl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    126620822
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA NDUS4 AAA_24 AAA_16 TsaE AAA_22
Other DBs
NCBI-GeneID: 126620822
NCBI-ProteinID: XP_050145103
LinkDB
Position
5:complement(37822351..37877791)
AA seq 200 aa
MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDTTVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDLTNQASFERAKKWVLELKSQGNPNMVMAL
AGNKADLVEARKVAAEDAQSYAQENGLFFLETSAKTADNVNDIFYEIAKRLPRVQPVQNP
AGMVLMDRPSERVASSSCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccaccactgggaacaagaacatcaatgccaaattggtgcttcttggggatgttgga
gctgggaaatcaagtctggtgttgcgctttgtaaaaggacaattcgttgaatttcaggaa
tcaacaataggtgctgccttcttctcacaaacattggctgtaaatgacacaaccgtaaaa
tttgagatttgggatacagcaggtcaagagaggtaccatagtttggcgccaatgtattac
agaggagctgctgctgcaattatcgtttatgatttaacaaatcaagcttcatttgagcga
gcaaaaaaatgggttcttgaactcaagtcacaaggtaacccaaacatggttatggcacta
gctggtaataaagcggatctggtagaggccaggaaagtggcagcagaggatgcacaatca
tatgctcaagagaatggccttttcttcctggaaacctctgcaaaaactgcagacaacgtc
aatgacattttctatgagatagcaaagagattacctcgagtgcagcctgtgcagaaccct
gcaggaatggttctcatggacagaccttctgaaagggtggcaagctcgtcctgttgctca
tag

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