Malus sylvestris (European crab apple): 126620891
Help
Entry
126620891 CDS
T09027
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 2-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126620891
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126620891
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126620891
Enzymes [BR:
msyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
126620891
Amino acid related enzymes [BR:
msyl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
126620891
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
126620891
Prokaryotic type
126620891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
AviRa
Motif
Other DBs
NCBI-GeneID:
126620891
NCBI-ProteinID:
XP_050145157
LinkDB
All DBs
Position
5:28857051..28860097
Genome browser
AA seq
624 aa
AA seq
DB search
MESKQTAAAASTTRLSPFKYSKRVLLKTILERRDGGLELIGERVVIGGWVKSSKEVRKEP
VPRIDGDHVPGEPEPRSDVSCVEILQSRIPFLRTIVKVLGGGSGGNYPLKDKLEAALHKP
PPPSTVFLKVGDGSCVASLQVVVESSLAPPGQLLHTGTCVIVEGLLQKPSVLQGKHVIEL
KVDHVHHIGIVEYSTYPLSKKRVPLDKLREFCHIRQRTTTVQSVMRIRNALEFAAHTFCQ
NNGFLSVQVPIITTTDGKGSSEKFHVTSLFTEAGEKEEPKKAVAEIDGVSLDVIKAAVKE
KSNLLEELKRTDSNKEAVAAAMQDLNKTNELASQLEAREKSKPKTSQKVDNVKSSEGYFS
SPTYLTASGRMHLESYACALGNVYSFGPRFRAEKGESPKHAAEMWMLEVELAFSELEEAI
NCADDFFKFLCKWVVENCSEDMKFVSQRIDKTRIDRLQSIISSSFERVSYSEALDALKKV
TDKKIETKIEWGASLTEADLSYLADEIYKKPVIIYNYPKETKPFYVRLNDDGKTVAAFDM
VVPKAGRLFSGSQNEERINILTARIKELGLAAQQYEWYLDLRRHGTVKHSGFNLEFDHIV
LFATGLNDVRDVIPFPRSHGKANY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaaacaaacagcggcagcagctagtaccacccgattgagccccttcaagtac
tcgaaacgggtgctcttgaaaaccatcttggagagaagggatggtggtttggagttaatt
ggtgagagggttgtgattggagggtgggtgaagtcctccaaggaggtcaggaaagagcct
gtgccacgtatagatggtgatcatgtgccgggtgaacccgaaccaaggtcagacgtcagc
tgcgtcgaaattcttcagtctcggataccttttttacgaacaattgtcaaggttttggga
ggaggaagtggtggcaattatcctcttaaggacaagttggaggcggcgcttcataagcct
ccgccaccttccactgtcttcttgaaagttggggatggttcttgcgttgcaagccttcag
gttgtcgttgaatcctccctggctcccccaggccagctcttgcatactggaacttgcgtc
atagtggaaggcttgctgcagaaaccttcggtactacagggcaaacatgttatcgagctg
aaagtggatcatgtccatcacatcggaatagtagaatatagcacgtatccattatccaaa
aaacgtgtgcctctagataaactaagggaattttgccacattaggcagcggacaactacg
gtgcaatctgttatgcgaatccgcaatgccttggagtttgcagctcacacattttgtcaa
aacaatggttttctttcggtgcaagtacccattataacaactacagacggcaaaggatcc
agcgaaaagttccatgtcactagccttttcaccgaagcaggtgaaaaggaggagcctaag
aaagctgttgctgaaattgatggtgttagtctagatgttatcaaggctgcagtaaaagag
aaaagtaacttactagaggaactcaagaggacagacagcaataaggaagcagtagctgct
gcaatgcaggacttaaacaaaacaaatgagttagcatcacaactggaagcaagagagaaa
tcaaagccgaaaacttctcagaaggttgacaatgttaaatcttctgagggttacttctct
agcccaacttatctaaccgcttctggccggatgcatctggagagctacgcttgtgccctt
ggaaatgtgtactcatttgggccaagatttcgagcagagaaaggagagtccccaaaacat
gctgcagaaatgtggatgcttgaagttgaattggccttttcagaattagaggaagcaatc
aattgtgctgatgactttttcaagttcctctgcaaatgggtagtggaaaattgttccgaa
gatatgaaatttgtttctcaacgaatcgacaaaaccagaattgatcgccttcagtcgatc
atttcaagttcatttgaaagagtttcctacagtgaagcattagatgcattaaagaaggtt
acagacaagaaaattgagacaaaaattgagtggggtgcttcactaactgaagcagatcta
agttatttggctgatgagatatacaagaagcctgtaattatatacaattatccaaaagaa
accaagccattttatgtccggttgaacgatgatggaaaaacagttgcagcatttgatatg
gttgttccaaaggctgggagattattttctggtagccaaaatgaggagcgcatcaacatt
ctaactgcaaggattaaggagttgggattggcagcgcagcagtatgaatggtacttggat
cttcgccggcatggaacggttaagcactcgggattcaatcttgagtttgatcatatcgtt
ctgtttgctactggcctgaatgatgtaagggatgtcatcccctttcccagaagccatggc
aaagccaactactag
DBGET
integrated database retrieval system
